DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and CG15255

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_609755.1 Gene:CG15255 / 34913 FlyBaseID:FBgn0028950 Length:261 Species:Drosophila melanogaster


Alignment Length:237 Identity:104/237 - (43%)
Similarity:140/237 - (59%) Gaps:17/237 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DPELLAGFYQGDI-----------KAHPIRTRNGIVNQIYHWPNRTVPYMIEDDAFADSHYREIL 76
            |||...||.:||:           :..| :.|||::|....||...|.|.|.|| |..:|.:.|.
  Fly    28 DPEEAGGFVEGDMMLTEEQQRNLEQGAP-KARNGLINTEKRWPGNVVVYRISDD-FDTAHKKAIQ 90

  Fly    77 RAISIIEENSCVIFKPATEMDFPMALVITSKGLGCNTVHLGYRNKTQVVNLEIYPLGEGCFRIGS 141
            ..|..:|.::|:.|:.||:.| ...|.:|:|..||.|. :||:...|.:|||||||||||||.|:
  Fly    91 TGIDTLELHTCLRFREATDED-KAYLTVTAKSGGCYTA-VGYQGAPQEMNLEIYPLGEGCFRPGT 153

  Fly   142 IIHELLHVLGFEHQHVSQNRDQYVSIQWKNINPQYNINFVNNDNSTAWHDFDEGYDYESVMHYVP 206
            |:||.:|.|||.||..|..||.::::.::||.|....|| .....|...||:.||||:|.:||.|
  Fly   154 ILHEFMHALGFYHQQSSSIRDDFINVIYENIVPGKEFNF-QKYADTVVTDFEVGYDYDSCLHYRP 217

  Fly   207 RAFSRNGQPTIVPLREGAENMGQRFYMSEKDIRKLNKMYRCP 248
            .|||.||:.|||||...|. :|||..:|.|||.|:|.||:||
  Fly   218 GAFSINGEDTIVPLDSSAV-IGQRVGLSSKDIDKINIMYKCP 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 86/189 (46%)
CG15255NP_609755.1 ZnMc_astacin_like 70..255 CDD:239807 86/189 (46%)

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