DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and mep1bb

DIOPT Version :9

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:XP_009294699.1 Gene:mep1bb / 327586 ZFINID:ZDB-GENE-030131-5797 Length:774 Species:Danio rerio


Alignment Length:221 Identity:79/221 - (35%)
Similarity:118/221 - (53%) Gaps:18/221 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 YQGDIKAHPIRTRNGIVNQIYHWPNRTVPYMIEDDAFADSHYREILRAISIIEENSCVIFKPAT- 94
            ::|||.......||.|:.:.|.|| :|:||..|||...::. ..||:|.......:|:.:||.| 
Zfish    61 FEGDILYDETLGRNSIIGEEYRWP-KTIPYYFEDDLEINAK-GVILKAFEQYRLKTCIDYKPWTG 123

  Fly    95 EMDFPMALVITSKGLGCNTVHLGYRNKTQVVNLEIYPLGEGCFRIGSIIHELLHVLGFEHQHVSQ 159
            |.::    :...||.||.: .:|.|.    |..:...:|.||.||.:|.||.||.|||.|:....
Zfish   124 EENY----ISVFKGNGCFS-SVGNRR----VGRQTLSIGSGCDRIATIEHEFLHALGFWHEQSRS 179

  Fly   160 NRDQYVSIQWKNI--NPQYNINFVNNDNSTAWHDFDEGYDYESVMHYVPRAFSRNGQPTIVP-LR 221
            :||.||||.|..|  ..::|.|..|:.:|:|   .:..|||.|:|||..:||....:|||:. :.
Zfish   180 DRDDYVSIMWDRITEGKEHNFNKYNDSSSSA---LNVPYDYSSMMHYSQKAFQSGSEPTIITRIP 241

  Fly   222 EGAENMGQRFYMSEKDIRKLNKMYRC 247
            ..:..:|||...|:.|:.|||::|.|
Zfish   242 AFSSVIGQRMEFSDSDLLKLNRLYNC 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 Astacin 53..249 CDD:279708 72/199 (36%)
ZnMc_astacin_like 55..245 CDD:239807 68/193 (35%)
mep1bbXP_009294699.1 ZnMc 39..267 CDD:294052 78/219 (36%)
Astacin 81..269 CDD:279708 73/201 (36%)
MAM 277..441 CDD:279023
MAM 277..440 CDD:99706
MATH 440..608 CDD:295307
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10127
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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