DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and nas-19

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_505893.2 Gene:nas-19 / 186926 WormBaseID:WBGene00003538 Length:396 Species:Caenorhabditis elegans


Alignment Length:209 Identity:53/209 - (25%)
Similarity:88/209 - (42%) Gaps:37/209 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GIVNQIYHWPNRTVPYMIEDDAFADSHYREILRAISIIEENSCVIFKPATEMDFPMALVITSKGL 109
            |:||..|...|..:..|:|.             ||:.|..::|:.|.........:.:.:....|
 Worm    53 GVVNYYYADKNNEIKEMVES-------------AIAYIANHTCIRFNEDQNAVQRVQIRMQQNWL 104

  Fly   110 GCNTVHLGYRNKTQVVNLEIYPLGEGCFRIGSIIHELLHVLGFEHQHVSQNRDQYVSIQW--KNI 172
            ..:||.....:.::.:. |:..|.:.|..||||:||..|.||..|:|...:||.::.:..  ...
 Worm   105 CQSTVGAPGMSMSKPIG-ELSMLVQSCDTIGSIVHEFSHSLGRFHEHTRPDRDNFMKVTTTVHEA 168

  Fly   173 NPQYNINFVNNDNSTAWHDFDEGYDYESVMHYVPRAFSRNGQPTIVPL-REGAENMGQR---FYM 233
            .|:      .:..:|.:..|:.|    |||.|....:   |..|:.|| .:..:.||.|   || 
 Worm   169 RPR------PSGMTTMYGPFEHG----SVMMYHADTY---GPGTMDPLDMDYKQTMGNRRVTFY- 219

  Fly   234 SEKDIRKLNKMYRC 247
               |:.|:|:.|.|
 Worm   220 ---DMYKINQYYGC 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 47/195 (24%)
nas-19NP_505893.2 Astacin 48..230 CDD:426242 52/207 (25%)

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