DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and nas-7

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_495552.2 Gene:nas-7 / 182368 WormBaseID:WBGene00003526 Length:382 Species:Caenorhabditis elegans


Alignment Length:235 Identity:78/235 - (33%)
Similarity:121/235 - (51%) Gaps:19/235 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ELFKD--PELLAGFYQGDIKAHPIRTRNGIVNQIYHWPNRTVPYMIEDDAFADSHYREIL-RAIS 80
            |||..  |..:...::.||:......|||:......|||..:||.|  ......|.|.:| :|:.
 Worm    53 ELFGKHIPVEVVNDFKSDIRLPRRHKRNGVSRAAKLWPNARIPYAI--SPHYSPHERALLAKAVK 115

  Fly    81 IIEENSCVIFKP--ATEMDFPMALVITSKGLGCNTVHLGYRNKTQVVNLEIYPLGEGCFRIGSII 143
            ...|.:|:.|.|  ..|.|:    :...|..||.: .:|..:..||::|:     .||....:||
 Worm   116 QYHEKTCIRFVPRQTGEPDY----LFIGKVDGCFS-EVGRTSGVQVLSLD-----NGCMEYATII 170

  Fly   144 HELLHVLGFEHQHVSQNRDQYVSIQWKNINPQYNINFVNNDNSTAWHDFDEGYDYESVMHYVPRA 208
            ||::||:||.|:|...:||.::.|.|:||:......|...|.|...: :.:.|||:|::||...|
 Worm   171 HEMMHVVGFYHEHERWDRDNFIDIIWQNIDRGALDQFGKVDLSKTSY-YGQPYDYKSILHYDSLA 234

  Fly   209 FSRNGQPTIVPLREGAENMGQRFYMSEKDIRKLNKMYRCP 248
            ||:||.||::|..:.| .:|.....|:.||.|:|:||.||
 Worm   235 FSKNGFPTMLPKVKSA-TIGNARDFSDVDISKINRMYNCP 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 63/192 (33%)
nas-7NP_495552.2 Astacin 87..274 CDD:426242 69/201 (34%)
ShK 347..382 CDD:426319
Blue background indicates that the domain is not in the aligned region.

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