DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and nas-37

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001024413.1 Gene:nas-37 / 181208 WormBaseID:WBGene00003553 Length:765 Species:Caenorhabditis elegans


Alignment Length:218 Identity:63/218 - (28%)
Similarity:97/218 - (44%) Gaps:34/218 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KAHPIRTRNGIVNQIYHWPNRTVPYMIEDDAFADSHYREILR-AISIIEENSCVIFKPATEMDFP 99
            :||| ..||       .|||.|:.|....   .:..:|:::| ||..:|:|.|..||   |....
 Worm   115 QAHP-DPRN-------FWPNLTISYEFYG---GEETWRQLIRSAIRHVEQNVCFKFK---ENGGD 165

  Fly   100 MALVITSKGLGCNTVHLGYRNKTQVVNLEIYPLGEGCFRIGSIIHELLHVLGFEHQHVSQNRDQY 164
            ...:...:|.||      :.|..:|...::..:|.||..:|.:.||.||.||..|:....:||.:
 Worm   166 RDGLRYYRGNGC------WSNVGRVGGRQLVSIGYGCDSLGIVSHETLHALGLWHEQSRDDRDNF 224

  Fly   165 VSIQWKNINPQYNINF-----VNNDNSTAWHDFDEGYDYESVMHYVPRAFSRNGQPTIVPLREG- 223
            :||....|......||     .|:||      ..:.||..|||||..::|:.:.....:..|:. 
 Worm   225 ISIVADKITRGTEGNFAKRTAANSDN------LGQPYDLGSVMHYGAKSFAYDWSSDTIKTRDWR 283

  Fly   224 -AENMGQRFYMSEKDIRKLNKMY 245
             ...:|||..:|.||.:.:|..|
 Worm   284 YQNTIGQRDGLSFKDAKMINTRY 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 55/197 (28%)
nas-37NP_001024413.1 Astacin 122..309 CDD:426242 59/210 (28%)
CUB 370..455 CDD:214483
TSP1 579..626 CDD:214559
Blue background indicates that the domain is not in the aligned region.

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