DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Semp1 and nas-15

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_508154.2 Gene:nas-15 / 180426 WormBaseID:WBGene00003534 Length:571 Species:Caenorhabditis elegans


Alignment Length:226 Identity:77/226 - (34%)
Similarity:113/226 - (50%) Gaps:17/226 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ELLAGFYQGDIKAHPIRTRNGIVNQIYHWPNRTVPYMIEDDAFADSHYREILRAISIIE--ENSC 87
            ||.|.  .|..|:...:..|.|.|::..||...:||.|....   |.|...|.|.|:.|  .::|
 Worm    97 ELFAN--GGSGKSEDGKWYNAIKNRLQLWPEGRIPYTISSQY---SSYSRSLIAASMQEYASHTC 156

  Fly    88 VIFKPATEMDFPMALVITSKGLGCNTVHLGYRNKTQVVNLEIYPLGEGCFRIGSIIHELLHVLGF 152
            :.:.|....|.....:...:  ||.:: :|.....|.::     ||.||.:.|.|:|||:|.:||
 Worm   157 IRWVPKEAADVNYVHIYPDR--GCYSM-VGKMGGKQSLS-----LGSGCIQKGIILHELMHAVGF 213

  Fly   153 EHQHVSQNRDQYVSIQWKNINPQYNINFVNNDNSTAWHDFDEGYDYESVMHYVPRAFSRNGQPTI 217
            .|:....:||.:::|.|.||.......|....:.|. .....||||.|:|||..:|||||||||:
 Worm   214 FHEQSRTDRDDHITIMWNNIQAGMQGQFEKYGHGTI-QSLGTGYDYGSIMHYGTKAFSRNGQPTM 277

  Fly   218 VPLREGAENMGQRFYMSEKDIRKLNKMYRCP 248
            :|.:.|| .:|||...|:.|..|:|.:|.||
 Worm   278 IPKKNGA-TIGQRNGFSKVDKFKINTLYGCP 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 64/191 (34%)
nas-15NP_508154.2 Astacin 121..308 CDD:426242 69/200 (35%)
ShKT 354..388 CDD:214586
ShK 436..471 CDD:426319
PHA03247 <474..534 CDD:223021
ShK 535..571 CDD:426319
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.