DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and nas-9

DIOPT Version :9

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_741532.1 Gene:nas-9 / 178875 WormBaseID:WBGene00003528 Length:546 Species:Caenorhabditis elegans


Alignment Length:215 Identity:62/215 - (28%)
Similarity:110/215 - (51%) Gaps:15/215 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RNGIVNQ---IYHWPN-RTVPYMIEDDAFADSHYREILRAISIIEENSCVIFK-PATEMDFPMAL 102
            |:|:..|   :..|.. :.:.|.: ||:..:|..::|..|:..|..|:|::|: .||...:.:..
 Worm   300 RSGVFFQESAVQKWDIWKPIQYTL-DDSLEESDKKDIRDALHEISINTCILFRYNATPKGYHLNY 363

  Fly   103 VITSKGLGCNTVHLGYRNKTQVVNLEIYPLGEGCFRIGSIIHELLHVLGFEHQHVSQNRDQYVSI 167
            :.......|...::|..:....:.|. :..|:   ..|..:||.:|.||..|||:..:||:|:.|
 Worm   364 MKVDSTTFCGLSYVGRTDPANPIYLS-FQCGD---NRGVAMHETMHALGVSHQHLRLDRDKYIKI 424

  Fly   168 QWKNINPQYNINFVNNDNSTAWHDFDEGYDYESVMHYVPRAFSRN-GQPTIVPL---REGAENMG 228
            .|.||:||:...|..:| :..:..:...|.|:|:|||.....::: .:||::||   :|....:|
 Worm   425 DWSNIDPQHYDTFAISD-AKLYTSYGTKYAYDSIMHYNAYLGAKDPNKPTMIPLVNPQENTPKLG 488

  Fly   229 QRFYMSEKDIRKLNKMYRCP 248
            ||..::..|||.|.|||..|
 Worm   489 QRAKLTRGDIRLLKKMYCRP 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 Astacin 53..249 CDD:279708 59/202 (29%)
ZnMc_astacin_like 55..245 CDD:239807 55/195 (28%)
nas-9NP_741532.1 Astacin 311..505 CDD:279708 56/199 (28%)
ZnMc_astacin_like 316..505 CDD:239807 55/194 (28%)
ShKT 510..546 CDD:214586
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10127
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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