DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and nas-32

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_503351.3 Gene:nas-32 / 178595 WormBaseID:WBGene00003550 Length:653 Species:Caenorhabditis elegans


Alignment Length:237 Identity:69/237 - (29%)
Similarity:104/237 - (43%) Gaps:37/237 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 YQGDI--------------KAHPIRTRNGIVNQIYHWPNRTVPYMIEDDAFADSHYREILR-AIS 80
            :||||              .:...|.:..|.|....||.:.|.|..  |:...:..::|:| ||:
 Worm   176 FQGDINLNNNQIAKISSEQSSKSRRKKRQIDNLAQFWPGKVVYYYF--DSGLTTTVQQIVRDAIT 238

  Fly    81 IIEENSCVIFK---PATEMDFPMALVITSKGLGCNTVHLGYRNKTQVVNLEIYPLGEGCFRIGSI 142
            .:|.|:|:.|:   .||..      |....|:||      |.:...:...:...||.||...|:.
 Worm   239 FLESNTCLKFELNSTATNR------VKIFSGVGC------YSDTGMLGGEQTLSLGYGCEVTGTA 291

  Fly   143 IHELLHVLGFEHQHVSQNRDQYVSIQWKNINPQYNINFVNNDNSTAWHDFDEGYDYESVMHYVPR 207
            .||:.|.||..|..:..:||.||:|...::......||:....:|:.:..|  |:|.|.|||..|
 Worm   292 AHEIAHTLGLFHTQMRSDRDDYVTIDLTDVPESSQQNFIKLTEATSTNLVD--YEYGSFMHYSGR 354

  Fly   208 AF-SRNGQPTIVPLRE-GAENMGQRFYMSEKDIRKLNKMYRC 247
            || |..|..:|||... ....||.|. ::..|::.||..|.|
 Worm   355 AFVSSGGVDSIVPKDPVMVYTMGGRI-VTFLDLKMLNTHYSC 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 58/195 (30%)
nas-32NP_503351.3 ZnMc_astacin_like 214..393 CDD:239807 58/195 (30%)

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