DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and nas-25

DIOPT Version :9

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_495880.1 Gene:nas-25 / 174412 WormBaseID:WBGene00003544 Length:399 Species:Caenorhabditis elegans


Alignment Length:212 Identity:62/212 - (29%)
Similarity:101/212 - (47%) Gaps:34/212 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 YHWPNRTVPYMIEDDAFADSHYREILR-AISIIEENSCVIFKPATEMDFPMALVITSKGLGCNTV 114
            |.|||.||||.:.:   ..|..::.:| ||..::..:|:.|:...|.        .|.|.....|
 Worm    48 YRWPNNTVPYYVGN---VTSTIKKSVRLAIEELQAWTCIRFQNVNEK--------YSDGDSVRIV 101

  Fly   115 HLGYRNK---TQVVNLEIYPLGEGCFRIGSIIHELLHVLGFEHQHVSQNRDQYVSIQWKNIN--- 173
            .||..:.   .|.:..:...|.:.|:.:|:.||||:|.:|.||.....:|::|:.|..:||:   
 Worm   102 DLGSCSSPIGRQQIGTQDVSLTKNCWGMGTAIHELMHAIGIEHTQSRSDRNRYLDILAQNIDNRD 166

  Fly   174 -PQYNINFVNNDNSTAWHDFDEGYDYESVMHYVPRAFS-RNGQPTIVPL-REGAENMGQ---RFY 232
             |.:.:.     :...|.:. ..|||.|||||...:|| ::.:.|::|. |...|.||.   .||
 Worm   167 LPNFELL-----SPRLWANL-VPYDYGSVMHYSADSFSNKDDEQTMLPKDRSFIETMGSMIPNFY 225

  Fly   233 MSEKDIRKLNKMYRCPD 249
                |..::|:.|:|.|
 Worm   226 ----DFDQINQYYQCYD 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 Astacin 53..249 CDD:279708 60/208 (29%)
ZnMc_astacin_like 55..245 CDD:239807 56/202 (28%)
nas-25NP_495880.1 Astacin 48..236 CDD:279708 60/208 (29%)
ZnMc_astacin_like 52..234 CDD:239807 56/202 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D681837at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10127
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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