DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and nas-25

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_495880.1 Gene:nas-25 / 174412 WormBaseID:WBGene00003544 Length:399 Species:Caenorhabditis elegans


Alignment Length:212 Identity:62/212 - (29%)
Similarity:101/212 - (47%) Gaps:34/212 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 YHWPNRTVPYMIEDDAFADSHYREILR-AISIIEENSCVIFKPATEMDFPMALVITSKGLGCNTV 114
            |.|||.||||.:.:   ..|..::.:| ||..::..:|:.|:...|.        .|.|.....|
 Worm    48 YRWPNNTVPYYVGN---VTSTIKKSVRLAIEELQAWTCIRFQNVNEK--------YSDGDSVRIV 101

  Fly   115 HLGYRNK---TQVVNLEIYPLGEGCFRIGSIIHELLHVLGFEHQHVSQNRDQYVSIQWKNIN--- 173
            .||..:.   .|.:..:...|.:.|:.:|:.||||:|.:|.||.....:|::|:.|..:||:   
 Worm   102 DLGSCSSPIGRQQIGTQDVSLTKNCWGMGTAIHELMHAIGIEHTQSRSDRNRYLDILAQNIDNRD 166

  Fly   174 -PQYNINFVNNDNSTAWHDFDEGYDYESVMHYVPRAFS-RNGQPTIVPL-REGAENMGQ---RFY 232
             |.:.:.     :...|.:. ..|||.|||||...:|| ::.:.|::|. |...|.||.   .||
 Worm   167 LPNFELL-----SPRLWANL-VPYDYGSVMHYSADSFSNKDDEQTMLPKDRSFIETMGSMIPNFY 225

  Fly   233 MSEKDIRKLNKMYRCPD 249
                |..::|:.|:|.|
 Worm   226 ----DFDQINQYYQCYD 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 56/202 (28%)
nas-25NP_495880.1 ZnMc_astacin_like 52..234 CDD:239807 56/202 (28%)

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