DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and Mep1b

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_032612.2 Gene:Mep1b / 17288 MGIID:96964 Length:704 Species:Mus musculus


Alignment Length:225 Identity:75/225 - (33%)
Similarity:112/225 - (49%) Gaps:27/225 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 YQGDIKAHPIRTRNGIVNQIYHWPNRTVPYMIEDDAFADSHYREILRAISIIEENSCVIFKP-AT 94
            ::||||.. ...:|.|:.....||: |:||::||....::. ..||.|.......:|:.||| :.
Mouse    51 FEGDIKLE-ANGKNSIIGDHKRWPH-TIPYVLEDSLEMNAK-GVILNAFERYRLKTCIDFKPWSG 112

  Fly    95 EMDFPMALVITSKGLGC----NTVHLGYRNKTQVVNLEIYPLGEGCFRIGSIIHELLHVLGFEHQ 155
            |.::    :...||.||    ..:|.|.:..:         :|..|.||.::.||.||.|||.|:
Mouse   113 EANY----ISVFKGSGCWSSVGNIHAGKQELS---------IGTNCDRIATVQHEFLHALGFWHE 164

  Fly   156 HVSQNRDQYVSIQWKNINP--QYNINFVNNDNSTAWHDFDEGYDYESVMHYVPRAFSRNGQPTIV 218
            ....:||.||.|.|..|.|  ::|.|..|:..|.:   .:..|||.|||||...||....:.|||
Mouse   165 QSRADRDDYVIIVWDRIQPGKEHNFNIYNDSVSDS---LNVPYDYTSVMHYSKTAFQNGTESTIV 226

  Fly   219 P-LREGAENMGQRFYMSEKDIRKLNKMYRC 247
            . :.|..:.:|||...|:.|:.|||::|.|
Mouse   227 TRISEFEDVIGQRMDFSDYDLLKLNQLYNC 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 65/197 (33%)
Mep1bNP_032612.2 ZnMc 30..256 CDD:469599 74/223 (33%)
MAM 266..429 CDD:459878
MATH 428..587 CDD:445786
EGF_CA 609..647 CDD:238011
Blue background indicates that the domain is not in the aligned region.

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