DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and LOC1273375

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:XP_312342.5 Gene:LOC1273375 / 1273375 VectorBaseID:AGAMI1_003808 Length:384 Species:Anopheles gambiae


Alignment Length:237 Identity:75/237 - (31%)
Similarity:112/237 - (47%) Gaps:20/237 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FKDPELLAGFY-QGDIKAHPIRTRNGIVNQIY---HWPNRTVPYMIEDDAFADSHYREILRAISI 81
            ||..|...|.| :|||....:|.|||:....:   .|||..|||:: .:.|..:....|..|::.
Mosquito    59 FKPWEAGLGVYKEGDIMERVVRQRNGVALSAFPNARWPNAVVPYVV-TNTFTTTQQGVIQSAMAQ 122

  Fly    82 IEENSCVIFKPATEMDFPMALVITSKGLGC-NTVHLGYRNKTQVVNLEIYPLGEGCFRIGSIIHE 145
            |...:||.|.|.|..  .:.:.|.:...|| :.|....||....|||:    ...|..||:::||
Mosquito   123 IAAATCVRFVPRTTQ--TLYVTIGNGESGCWSYVGRSTRNSENQVNLQ----SPECVDIGTVVHE 181

  Fly   146 LLHVLGFEHQHVSQNRDQYVSIQWKNINPQYN--INFVNNDNSTAWHD---FDEGYDYESVMHY- 204
            |:|.:||.|:....:||::|:|....:.|:|.  ..:.:|....|..|   :...|||.||||| 
Mosquito   182 LMHSIGFYHEFTRPDRDEWVTIDQGALAPEYQSATFYADNYGKMAASDVVLYGRKYDYGSVMHYS 246

  Fly   205 -VPRAFSRNGQPTIVPLREGAENMGQRFYMSEKDIRKLNKMY 245
             ...|.||. :|.:..|:....:.|....:|..||..:|.||
Mosquito   247 KYAAAASRT-RPVMNNLQPWTGDFGNDNGLSAADIIDINYMY 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 59/197 (30%)
LOC1273375XP_312342.5 ZnMc_astacin_like 97..287 CDD:239807 59/197 (30%)

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