DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and Bmp1

DIOPT Version :9

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001346950.1 Gene:Bmp1 / 12153 MGIID:88176 Length:991 Species:Mus musculus


Alignment Length:201 Identity:68/201 - (33%)
Similarity:110/201 - (54%) Gaps:15/201 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 WPNRTVPYMIEDDAFADSHYREILRAISIIEENSCVIFKPATEMDFPMALVITSKGLGCNTVHLG 117
            ||:..:|::|..: |..|......:|:...|:::||.|...|:.|  ..:|.|.:..||.: ::|
Mouse   135 WPDGVIPFVIGGN-FTGSQRAVFRQAMRHWEKHTCVTFLERTDED--SYIVFTYRPCGCCS-YVG 195

  Fly   118 YR-NKTQVVNLEIYPLGEGCFRIGSIIHELLHVLGFEHQHVSQNRDQYVSIQWKNINPQYNINFV 181
            .| ...|.::     :|:.|.:.|.::|||.||:||.|:|...:||::|||..:||.|....||:
Mouse   196 RRGGGPQAIS-----IGKNCDKFGIVVHELGHVIGFWHEHTRPDRDRHVSIVRENIQPGQEYNFL 255

  Fly   182 NNDNSTAWHDFDEGYDYESVMHYVPRAFSRN-GQPTIVPLRE--GAE-NMGQRFYMSEKDIRKLN 242
            ..:.... ....|.||::|:|||....|||. ...||||..|  |.: ::|||..:|:.||.:..
Mouse   256 KMEVQEV-ESLGETYDFDSIMHYARNTFSRGIFLDTIVPKYEVNGVKPSIGQRTRLSKGDIAQAR 319

  Fly   243 KMYRCP 248
            |:|:||
Mouse   320 KLYKCP 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 Astacin 53..249 CDD:279708 68/201 (34%)
ZnMc_astacin_like 55..245 CDD:239807 63/194 (32%)
Bmp1NP_001346950.1 ZnMc_BMP1_TLD 126..325 CDD:239808 66/199 (33%)
CUB 327..436 CDD:278839
CUB 440..549 CDD:278839
FXa_inhibition 560..592 CDD:317114
CUB 596..705 CDD:278839
FXa_inhibition 712..747 CDD:317114
CUB 752..861 CDD:278839
CUB 865..978 CDD:278839
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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