DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and accsl2

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:XP_017948750.2 Gene:accsl2 / 100495810 XenbaseID:XB-GENE-989873 Length:492 Species:Xenopus tropicalis


Alignment Length:276 Identity:80/276 - (28%)
Similarity:125/276 - (45%) Gaps:53/276 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PQIWGVIFLFTPTVFSEL----FKDPELLAGFYQGDIKAHPIRTRNGIVNQIYH----------- 52
            |.:.|.|..  |....:|    ::|.|.    |..|:.:..:::.||.|.:::.           
 Frog     5 PLLIGCICF--PVAVDQLPSGNYEDEEA----YHEDVFSQILKSNNGTVKKLWQGDIAIETGRSA 63

  Fly    53 -------WPNRT-----VPYMIEDDAFADSHYREILRAISIIEENSCVIF-KPATEMDFPMALVI 104
                   ||...     |||.:..| ::|:....|..|:......:||.| :.:||.||   |.|
 Frog    64 TKCTSCLWPKSADGTVRVPYRLSAD-YSDNEKSSIRDALLEFNTLTCVHFVERSTEEDF---LDI 124

  Fly   105 TSKGLGCNTVHLGYRNKTQVVNLEIYPLGEGCFRIGSIIHELLHVLGFEHQHVSQNRDQYVSIQW 169
            .|.. ||.: .:|.....|.::|    :..||...|.|.||:.|.|||.|:....:||.|:.:.|
 Frog   125 VSDS-GCWS-SIGRTGGAQTLSL----MSSGCLAKGIIQHEVDHALGFYHEQSRSDRDTYIDVLW 183

  Fly   170 KNI--NPQYNINFVNNDNSTAWHDFDEGYDYESVMHYVPRAFSR-NGQPTIVPLREGAENMGQRF 231
            :.|  :...:...|:.||      .|..|||.|||||...|||. :|||::.|..:...|:|||:
 Frog   184 QYICESDWGSFEMVDTDN------LDLPYDYSSVMHYGWYAFSNTSGQPSLRPKPDPTANIGQRY 242

  Fly   232 YMSEKDIRKLNKMYRC 247
            .:|..|:.|:.::|.|
 Frog   243 GLSPLDVSKVKELYGC 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 64/198 (32%)
accsl2XP_017948750.2 ZnMc 76..258 CDD:469599 65/197 (33%)
CUB 261..374 CDD:238001
CUB 377..488 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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