DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and astl2d.5

DIOPT Version :9

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:XP_031756347.1 Gene:astl2d.5 / 100495579 XenbaseID:XB-GENE-22069752 Length:497 Species:Xenopus tropicalis


Alignment Length:246 Identity:78/246 - (31%)
Similarity:116/246 - (47%) Gaps:37/246 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VFSELFKD------PELLAGFYQGDIKAHPIRTRNGIVNQIYHWPNRT--VPYMIEDDAFADSHY 72
            |||.:.|.      |.:     |.||.....|:.......::...|.|  |||.: ||.:::|..
 Frog    43 VFSRILKANQGNRVPRV-----QEDIAVGVSRSAITYTECLWQKTNGTVYVPYTL-DDKYSNSEV 101

  Fly    73 REILRAISIIEENSCVIFKPATEMDFPMALVITSKGLGCNTVHLGYRNKTQVVNLEIYPLGEG-C 136
            ..:..|:.:....:||.|.|.|:.|   ..|..:.|.||.: ::|.:...|||::|     :| |
 Frog   102 NTMTSAMEVYATLTCVQFVPYTDED---DYVNITSGDGCWS-YMGRQRGAQVVSVE-----KGYC 157

  Fly   137 FRIGSIIHELLHVLGFEHQHVSQNRDQYVSIQWKNINP----QYNINFVNNDNSTAWHDFDEGYD 197
            ...|:.:|||.|.|||.|:....:||.||:|.::.|:|    ::.....||..:|        ||
 Frog   158 TSEGTTMHELNHALGFVHEQSRSDRDNYVNIMYQYISPGDVAEFKKMESNNLGTT--------YD 214

  Fly   198 YESVMHYVPRAFSR-NGQPTIVPLREGAENMGQRFYMSEKDIRKLNKMYRC 247
            |.|||||...|||. .||.|||........:|....|:..||.|:|::|.|
 Frog   215 YRSVMHYPAWAFSNTTGQNTIVAKPNPNIIIGAGNTMTSLDIIKINRLYEC 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 Astacin 53..249 CDD:279708 69/203 (34%)
ZnMc_astacin_like 55..245 CDD:239807 67/197 (34%)
astl2d.5XP_031756347.1 ZnMc 83..265 CDD:412141 68/199 (34%)
CUB 268..377 CDD:395345
CUB 382..493 CDD:238001
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D681837at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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