DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and astl3b.4

DIOPT Version :9

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:XP_031746772.1 Gene:astl3b.4 / 100491283 XenbaseID:XB-GENE-22069691 Length:533 Species:Xenopus tropicalis


Alignment Length:239 Identity:87/239 - (36%)
Similarity:113/239 - (47%) Gaps:23/239 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VFSELFK-DPELLAGFYQGDIKAHPIRTRNGIVNQIYHWPNRT-----VPYMIEDDAFADSHYRE 74
            ||:::.| :..:....|:|||.....|:.......:  ||..|     |||....:..|| ....
 Frog    78 VFTQISKVNRGISVPTYEGDILRPEGRSAMNCTECL--WPKSTDGTVIVPYNFSSNYSAD-QLAL 139

  Fly    75 ILRAISIIEENSCVIFKP-ATEMDFPMALVITSKGLGCNTVHLGYRNKTQVVNLEIYPLGEGCFR 138
            ...|:...|..:||.|.| |.|..|   |.|.| |.|| ...||.....|.|.|..|    ||..
 Frog   140 FKSAMQEYESLTCVRFVPRANETAF---LNIIS-GSGC-VSFLGKLGGAQTVQLASY----GCIY 195

  Fly   139 IGSIIHELLHVLGFEHQHVSQNRDQYVSIQWKNINPQYNINFVNNDNSTAWHDFDEGYDYESVMH 203
            .|.|.|||.|.|||.|:....:||.||:|..:||.|.|..||    |....::....|||.||||
 Frog   196 RGIIQHELNHALGFYHEQSRSDRDDYVTIHTENILPGYEGNF----NKANTNNLGLEYDYSSVMH 256

  Fly   204 YVPRAFSRNGQPTIVPLREGAENMGQRFYMSEKDIRKLNKMYRC 247
            |...|||:||..||||..:....:|||..:|..|:.|:|::|:|
 Frog   257 YPGDAFSKNGNLTIVPKPDPTVPIGQRDGLSILDVSKINRLYQC 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 Astacin 53..249 CDD:279708 79/201 (39%)
ZnMc_astacin_like 55..245 CDD:239807 75/195 (38%)
astl3b.4XP_031746772.1 ZnMc_hatching_enzyme 119..300 CDD:239810 75/194 (39%)
CUB 304..412 CDD:238001
CUB 417..525 CDD:238001
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D472790at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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