DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15255 and Nrx-IV

DIOPT Version :10

Sequence 1:NP_609755.1 Gene:CG15255 / 34913 FlyBaseID:FBgn0028950 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_524034.2 Gene:Nrx-IV / 39387 FlyBaseID:FBgn0013997 Length:1284 Species:Drosophila melanogaster


Alignment Length:230 Identity:48/230 - (20%)
Similarity:73/230 - (31%) Gaps:76/230 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 NVVVYRISD------DFDTAHKKAIQTGIDTLELHTCLRFREATDEDKAYLTVT--------AKS 121
            |||.:||:|      .||..|...|.           |.|| .|.|:......|        :.:
  Fly   796 NVVTFRIADASINLPPFDMGHSGDIY-----------LEFR-TTQENSVIFHATGPTDYIKLSLN 848

  Fly   122 GGCYTAVGYQGAPQEMNLEI---YPLGEGCFR---------------PGTILHEFMHALG---FY 165
            ||......||.....:.:.:   |.|.:..:.               .|:|..|.....|   ..
  Fly   849 GGNKLQFQYQAGSGPLGVNVGTSYHLNDNNWHTVSVERNRKEARLVVDGSIKAEVREPPGPVRAL 913

  Fly   166 HQQSSSI-------RDDFINVIYENIVPGKEFNFQKYADTVVTDFEVG----------------- 206
            |..|..:       ||.::..|...::.||..:.::|:...:.....|                 
  Fly   914 HLTSDLVIGATTEYRDGYVGCIRALLLNGKMVDLKEYSKRGLYGISTGCVGRCESNPCLNNGTCI 978

  Fly   207 --YDYDSCLHYRPGAFS--INGEDTIVPLDSSAVI 237
              ||..|| ..|..||.  |..::..|.|.||::|
  Fly   979 ERYDGYSC-DCRWSAFKGPICADEIGVNLRSSSII 1012

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15255NP_609755.1 ZnMc_astacin_like 70..255 CDD:239807 48/230 (21%)
Nrx-IVNP_524034.2 FA58C 57..184 CDD:238014
LamG 192..340 CDD:238058
LamG 376..514 CDD:238058
EGF 546..575 CDD:394967
LamG 819..943 CDD:214598 22/135 (16%)
EGF_CA 966..998 CDD:238011 7/32 (22%)
Laminin_G_2 1032..1156 CDD:460494
4.1m 1239..1255 CDD:128590
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.