DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15255 and nas-27

DIOPT Version :9

Sequence 1:NP_001285958.1 Gene:CG15255 / 34913 FlyBaseID:FBgn0028950 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_493926.2 Gene:nas-27 / 188809 WormBaseID:WBGene00003545 Length:428 Species:Caenorhabditis elegans


Alignment Length:234 Identity:64/234 - (27%)
Similarity:107/234 - (45%) Gaps:22/234 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 EGDMMLTEEQQRNLEQG-----APKARNGLINTE-KRW--PGNVVVYRISDDFDTAHKKAIQTGI 93
            |||:.......:.|.||     ..:||..:|..: |:|  |   :.|....:|.:..::.:...:
 Worm    30 EGDINSLVGVGQYLYQGDIAVVKSRARRAVIRQKHKKWKLP---MPYSFDRNFPSRSRQRVLEAM 91

  Fly    94 DTLELHTCLRFREATDEDKAYLTVTAKSG-GCYTAVGYQGAPQEMNLEIYPLGEGCF-RPGTILH 156
            ......||:.|.|   ....|..|:...| ||::.||.|.:.:|.:|.   |...|. ....:.|
 Worm    92 QFWSEKTCVTFHE---NRYVYPHVSIFEGNGCWSFVGKQPSLREQSLS---LERSCTDHTFVVAH 150

  Fly   157 EFMHALGFYHQQSSSIRDDFINVIYENIVPGKEFNFQKYADTVVTDFEVGYDYDSCLHYRPGAFS 221
            |..|.|||||:.:...||.||::.|.|:.|...|.|.|.::..:...|..|:|.|.:||....|:
 Worm   151 EIAHTLGFYHEHARGDRDQFISIDYSNVNPNLTFAFAKESEKQLDHQEAAYEYGSVMHYSVDQFA 215

  Fly   222 IN-GEDTIVPLDS--SAVIGQRVGLSSKDIDKINIMYKC 257
            :| ....|...|.  :..:|.|:..:.:|:.::|::|.|
 Worm   216 VNTNRPVIYARDQKFAQAMGNRMRATFQDVSRMNVLYNC 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15255NP_001285958.1 Astacin 66..258 CDD:279708 55/199 (28%)
ZnMc_astacin_like 70..255 CDD:239807 50/189 (26%)
nas-27NP_493926.2 Astacin 65..254 CDD:279708 54/197 (27%)
ZnMc_astacin_like 70..252 CDD:239807 51/190 (27%)
CUB 334..410 CDD:294042
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D681837at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10127
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.