DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek3 and Lrfn1

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:NP_001135393.1 Gene:Lrfn1 / 80749 MGIID:2136810 Length:766 Species:Mus musculus


Alignment Length:441 Identity:114/441 - (25%)
Similarity:169/441 - (38%) Gaps:88/441 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GPRPQRRLHPPLRPRLPLHLHLLLWLLCCCSQLGQLRAECPAVCECKWKSGKESVLCLNANLTHI 104
            ||.......||     |..|..|| ||...:..||   .||..|.|:..:...::||....|..:
Mouse     4 GPFSSGLFSPP-----PAALPFLL-LLWAGASRGQ---PCPGRCICQNVAPTLTMLCAKTGLLFV 59

  Fly   105 PQPLDAGTQLLDLSGNEIQLIPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQ 169
            |..:|.....|.|:.|.|..:....|  |.:.:|..:.|:|..:..:...||..|..|..|.|..
Mouse    60 PPAIDRRVVELRLTDNFIAAVRRRDF--ANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHLDS 122

  Fly   170 NLLSAIPSLALYHVSELRELRLSGNPILRVPDDAFGHVPQLVK-LELSDCRLSHIAVRAFAGLES 233
            |.|:.:....|..:..||.|.|..|.|.:|...||......|: |:||...|..:...| .|...
Mouse   123 NRLAEVRGDQLRGLGNLRHLILGNNQIRKVESAAFDAFLSTVEDLDLSYNNLEALPWEA-VGQMV 186

  Fly   234 SLEWLKLDGNRLSEVRSGTITSLASLHGLELAR-------------------------------- 266
            :|..|.||.|.:..:..||...|..|..|::..                                
Mouse   187 NLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGGGPKPPTPLTVSFGG 251

  Fly   267 NTWNCSCSLRPLRAWMLQQNIPSGIPPTCESPPRLSGRAWDKLDVDDFACVPQIVATDTTAHG-- 329
            |..:|:|.|..||....:.::     .||.:|..|:.|.:..:..::|.|.|.::........  
Mouse   252 NPLHCNCELLWLRRLTREDDL-----ETCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALV 311

  Fly   330 VEGRNITMSCYVEGVPQPAVKWLLKN-RLIANLS---AGGDGDSDSEPRTAAATQGRKTYVVNML 390
            |||:.:::.|...|.|:|.|.|:..: ||:.|.|   ..|||..|                    
Mouse   312 VEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLD-------------------- 356

  Fly   391 RNASNLTILTADMQDAGIYTCAAENKAGKVEASVTLAV-----SRRPPEAP 436
                 :||.|  ::|:|.:||.|.|.||:..|.|.:.|     ...||.||
Mouse   357 -----VTITT--LRDSGTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAP 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 44/189 (23%)
leucine-rich repeat 112..137 CDD:275380 6/24 (25%)
LRR_8 137..196 CDD:290566 17/58 (29%)
leucine-rich repeat 138..161 CDD:275380 6/22 (27%)
leucine-rich repeat 162..185 CDD:275380 6/22 (27%)
LRR_8 184..245 CDD:290566 21/61 (34%)
leucine-rich repeat 186..209 CDD:275380 9/22 (41%)
leucine-rich repeat 210..234 CDD:275380 7/24 (29%)
leucine-rich repeat 235..258 CDD:275380 8/22 (36%)
LRRCT 267..316 CDD:214507 12/48 (25%)
IG_like 328..428 CDD:214653 30/105 (29%)
Ig 335..425 CDD:143165 26/93 (28%)
Lrfn1NP_001135393.1 LRR 1 66..87 5/22 (23%)
leucine-rich repeat 67..90 CDD:275380 6/24 (25%)
PPP1R42 70..226 CDD:411060 44/158 (28%)
LRR 2 90..111 5/20 (25%)
leucine-rich repeat 91..114 CDD:275380 6/22 (27%)
LRR 3 114..135 6/20 (30%)
leucine-rich repeat 115..138 CDD:275380 6/22 (27%)
LRR 4 138..159 9/20 (45%)
leucine-rich repeat 139..163 CDD:275380 9/23 (39%)
LRR 5 163..184 6/21 (29%)
leucine-rich repeat 164..187 CDD:275380 7/23 (30%)
LRR 6 187..208 7/20 (35%)
leucine-rich repeat 188..211 CDD:275380 8/22 (36%)
LRR 7 211..232 2/20 (10%)
leucine-rich repeat 212..230 CDD:275380 2/17 (12%)
LRRCT 252..>284 CDD:214507 10/36 (28%)
Ig 299..387 CDD:416386 30/114 (26%)
Ig strand A 299..302 CDD:409353 0/2 (0%)
Ig strand A' 306..310 CDD:409353 0/3 (0%)
Ig strand B 316..324 CDD:409353 1/7 (14%)
Ig strand C 330..335 CDD:409353 2/4 (50%)
Ig strand C' 338..340 CDD:409353 0/1 (0%)
Ig strand D 346..350 CDD:409353 0/3 (0%)
Ig strand E 353..357 CDD:409353 2/28 (7%)
Ig strand F 367..374 CDD:409353 3/6 (50%)
Ig strand G 377..387 CDD:409353 3/9 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..424 3/4 (75%)
FN3 426..500 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 568..601
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 645..742
PDZ-binding 763..766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43981
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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