DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek3 and lrrc38b

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:XP_021335529.1 Gene:lrrc38b / 799882 ZFINID:ZDB-GENE-141216-65 Length:291 Species:Danio rerio


Alignment Length:254 Identity:78/254 - (30%)
Similarity:107/254 - (42%) Gaps:41/254 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 CPAVCECKWKSGKESVLCLNANLTHIPQPLDAGTQLLDLSGNEIQLIPDDSFATAQLLNLQKVYL 143
            |||:|.|   ....:|.|....||.:|..:....:.|.|:.|.|..||.|......         
Zfish    26 CPAICLC---PDPHTVDCSGRGLTRLPDEIPLDVRRLLLADNWIPRIPSDFLVLYS--------- 78

  Fly   144 ARCHLRLIERHAFRKLINLVELDLSQNLLSAIPSLALYHVSELRELRLSGNPILRVPDDAFGHVP 208
                             :||.|||..|.||.|....|...|.|..|.|..|.:..:|...||...
Zfish    79 -----------------DLVYLDLRNNSLSNIEPGTLSTSSRLVFLDLGCNNLTEIPKGTFGESR 126

  Fly   209 QLVKLEL-SDCRLSHIAVRAFAGLESSLEWLKLDGNRLSEVRSGTITSLASLHGLELARNTWNCS 272
            .|:||.| ::..||.:...||.|| :||..|:|:.|.||.::.|.::.|.||..:.|..|.|.|:
Zfish   127 SLIKLRLGNNPYLSMVNEDAFMGL-TSLRELELERNALSGLQVGALSQLPSLRVVRLEGNPWVCN 190

  Fly   273 CSLRPLRAWMLQQN---IPSGIP-PTCESPPRLSGR--AWDKLDVDDF-ACVPQIVATD 324
            |:...|..| |::|   :|:||. ..|..|  ..||  ...:|..|.| .|...:..||
Zfish   191 CNFANLFTW-LEENSHKLPNGIDGMECSLP--TDGRRVPLSQLSQDSFRECQITLTLTD 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 47/157 (30%)
leucine-rich repeat 112..137 CDD:275380 7/24 (29%)
LRR_8 137..196 CDD:290566 15/58 (26%)
leucine-rich repeat 138..161 CDD:275380 0/22 (0%)
leucine-rich repeat 162..185 CDD:275380 10/22 (45%)
LRR_8 184..245 CDD:290566 23/61 (38%)
leucine-rich repeat 186..209 CDD:275380 7/22 (32%)
leucine-rich repeat 210..234 CDD:275380 10/24 (42%)
leucine-rich repeat 235..258 CDD:275380 8/22 (36%)
LRRCT 267..316 CDD:214507 18/55 (33%)
IG_like 328..428 CDD:214653
Ig 335..425 CDD:143165
lrrc38bXP_021335529.1 LRRNT 26..56 CDD:214470 10/32 (31%)
leucine-rich repeat 36..58 CDD:275380 5/21 (24%)
PLN00113 <43..>185 CDD:331614 50/168 (30%)
leucine-rich repeat 59..79 CDD:275380 7/45 (16%)
leucine-rich repeat 80..103 CDD:275380 10/22 (45%)
LRR_8 102..163 CDD:316378 23/61 (38%)
leucine-rich repeat 104..127 CDD:275380 7/22 (32%)
leucine-rich repeat 128..152 CDD:275380 10/24 (42%)
leucine-rich repeat 153..176 CDD:275380 8/22 (36%)
TPKR_C2 185..235 CDD:326558 17/52 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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