DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek3 and rtn4rl1

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:NP_001072520.1 Gene:rtn4rl1 / 779975 XenbaseID:XB-GENE-961465 Length:455 Species:Xenopus tropicalis


Alignment Length:460 Identity:105/460 - (22%)
Similarity:162/460 - (35%) Gaps:116/460 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 HLLLWLLCCCSQLGQLRAECPAVCECKWKSGKESVLCLNANLTHIPQPLDAGTQLLDLSGNEIQL 124
            ||.|:|:....|: .|.:.||..|.|  .....:|.|...|...||:.:...::.:.|..|:|.:
 Frog     7 HLDLFLVLFGLQI-PLISLCPVNCVC--YPTPMTVSCQAHNFGAIPEGIPENSERIFLQNNQITM 68

  Fly   125 IPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQNL------------------ 171
            :....|..    :|..::|...::..|:...|....||.||||..|.                  
 Frog    69 LHRGDFGP----SLVTLWLYSNNITFIDPATFEGFDNLEELDLGDNRYLRALAADTFQGLSRLHA 129

  Fly   172 -------LSAIPSLALYHVSELRELRLSGNPILRVPDDAFGHVPQLVKLELSDCRLSHIAVRAFA 229
                   ||::||.....:..|:.|.|..|.|..:.||.|..:..|..|.|...:|..:....|.
 Frog   130 LHLYKCGLSSLPSGIFSGLHSLQFLYLQDNYIEFLQDDIFIDLVNLSYLFLHGNKLWSLHQNTFR 194

  Fly   230 GL---------ESSLEW--------------LKLDGNRLSEVRSGTITSLASLHGLELARNTWNC 271
            ||         ::.|:|              |.|..|.|:|::...:..|::|..|.|..|.|:|
 Frog   195 GLVNLDRLLLHQNQLQWVHRTAFHDLKRLTMLFLFNNSLTELQGECLAHLSALEFLRLNGNPWDC 259

  Fly   272 SCSLRPLRAWM-----LQQNIPSGIPPTCESPPRLSGRAWDKLDVDDFA-C-----VPQI-VATD 324
            .|..|.|..|:     ...|:      .||||..|:|.....|..:||. |     :.|| ..|.
 Frog   260 GCKARSLWEWLRGFRGSSSNV------ICESPDHLAGMDLKVLKTEDFMHCSGSESLHQIKTHTF 318

  Fly   325 TTAHGV--EGRNITMSCYVEGVPQPAVKWLLKNRLIANLSAG---GDGDSDSEPRTAAATQGRKT 384
            :|.|.:  :|.:...|...:|               ..|..|   .:..:..:||..:...| |.
 Frog   319 STTHRIAHKGHHSHHSSKEKG---------------KELDVGLHQNEPAAPPDPRPGSRKPG-KN 367

  Fly   385 YVVNMLRNASNLTILTADMQDAGIY--------------TCAAENKAGKVEASVTLAVSRRPPEA 435
            ...:..||..:..:....|.|...|              |.:.:.|        |....|.|...
 Frog   368 CTSHKNRNRISKPVSVKSMNDLQDYAPDYHHKFNFGTLPTASTKRK--------TKCTRRTPVRI 424

  Fly   436 PWGVR 440
            |.||:
 Frog   425 PSGVQ 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 45/204 (22%)
leucine-rich repeat 112..137 CDD:275380 4/24 (17%)
LRR_8 137..196 CDD:290566 19/83 (23%)
leucine-rich repeat 138..161 CDD:275380 4/22 (18%)
leucine-rich repeat 162..185 CDD:275380 10/47 (21%)
LRR_8 184..245 CDD:290566 20/83 (24%)
leucine-rich repeat 186..209 CDD:275380 8/22 (36%)
leucine-rich repeat 210..234 CDD:275380 7/32 (22%)
leucine-rich repeat 235..258 CDD:275380 8/36 (22%)
LRRCT 267..316 CDD:214507 17/54 (31%)
IG_like 328..428 CDD:214653 18/118 (15%)
Ig 335..425 CDD:143165 15/106 (14%)
rtn4rl1NP_001072520.1 LRRNT 25..53 CDD:279764 9/29 (31%)
leucine-rich repeat 37..58 CDD:275380 5/20 (25%)
PLN00113 46..>255 CDD:331614 47/212 (22%)
leucine-rich repeat 78..101 CDD:275380 4/22 (18%)
leucine-rich repeat 102..126 CDD:275380 6/23 (26%)
leucine-rich repeat 127..150 CDD:275380 4/22 (18%)
leucine-rich repeat 151..174 CDD:275380 8/22 (36%)
LRR_8 174..233 CDD:316378 12/58 (21%)
leucine-rich repeat 175..198 CDD:275380 7/22 (32%)
leucine-rich repeat 199..222 CDD:275380 2/22 (9%)
leucine-rich repeat 223..246 CDD:275380 6/22 (27%)
TPKR_C2 255..>290 CDD:326558 13/40 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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