DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek3 and lrrc4.2

DIOPT Version :10

Sequence 1:NP_523575.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:NP_001093494.1 Gene:lrrc4.2 / 566572 ZFINID:ZDB-GENE-030131-7997 Length:644 Species:Danio rerio


Alignment Length:696 Identity:173/696 - (24%)
Similarity:246/696 - (35%) Gaps:236/696 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LLW-----------LLCC-----------CSQLGQLRAECPAVCECKWKSGKESVLCLNANLTHI 104
            |||           |||.           .:..|||  .||:||.|...|.|  |:|...:|..:
Zfish     3 LLWQVTVHRAWNAALLCAVYLMVRSWSVSAAPSGQL--TCPSVCFCSNVSNK--VVCTRRSLVRV 63

  Fly   105 PQPLDAGTQLLDLSGNEIQLIPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQ 169
            |..:.|.|:.|:|..|.|:.|...:|  ..|.:|:.:.|.|..:|.||..||..|.:|..|:|..
Zfish    64 PPGIPATTRHLNLMENSIETIEAGTF--QHLRHLEVLQLGRNSIRQIEVGAFSGLNSLNTLELFD 126

  Fly   170 NLLSAIPSLALYHVSELRELRLSGNPILRVPDDAFGHVPQLVKLELSDCR-LSHIAVRAFAGLES 233
            |.|:.|||.|..::|:||||.|..|||..:|..||..||.|::|:|.:.| |.:|:..||.||.:
Zfish   127 NRLTVIPSGAFEYLSKLRELWLRSNPIESIPSYAFNRVPSLMRLDLGELRKLEYISEGAFEGLHN 191

  Fly   234 ---------------------SLEWLKLDGNRLSEVRSGTITSLASL------------------ 259
                                 .||.|::..|...|::.|:...|.||                  
Zfish   192 LKYLNLGMCNLREMPVLTPLVGLEELEMSENYFPELKPGSFRGLKSLKKLWIMNSRITTIERNAF 256

  Fly   260 ------------HG------------------LELARNTWNCSCSLRPLRAWMLQQNIP--SGIP 292
                        |.                  |.|..|.|.|.|.:..| ||.|::.||  |...
Zfish   257 DDVTALVELNLAHNNLSSLPHDLFAPLSYLVELHLHHNPWRCDCDVVWL-AWWLREYIPTNSTCC 320

  Fly   293 PTCESPPRLSGRAWDKLDVDDFAC-VPQIVATDTTAHGVEGRNITMSCYVEGVPQPAVKWLLKNR 356
            ..|.:|..|.||...::|...|.| .|.|:......:....|...:.|  ...|..:|:|||.|.
Zfish   321 GRCHTPAYLRGRYLVEVDQSTFQCSAPFILDAPRDLNISAERVAELKC--RTAPMSSVRWLLPNG 383

  Fly   357 LIANLSAGGDGDSDSEPRTAAATQGRKTYVVNMLRNASNLTILTADMQDAGIYTCAAENKAGKVE 421
            .:  |:.|     .:.||.:....|        ..|.||  :|.|   |.|:|||...|.||...
Zfish   384 TV--LTHG-----SNHPRISVLNDG--------TLNFSN--VLPA---DTGVYTCMVTNMAGNSN 428

  Fly   422 ASVTLAV---------------------------------------------------------- 428
            ||..|.|                                                          
Zfish   429 ASAYLNVTAAELNTSNLSYFTTVTVEEVEPTSQEVIKPKTVTASPSVFQPVFISTPTVLLQTPRQ 493

  Fly   429 --------SRRPP----EAPWGVRIILLGAVAALLLVGGSSFAAICLCSLQRRRKLRLWNSVPPV 481
                    :.|||    |.....:||:...||..||      ||:.|.:..:.||.....|.  |
Zfish   494 VSVPTVRGTTRPPASLDEVMKTTKIIIGCFVAVTLL------AAVMLIAFYKLRKRHQQRST--V 550

  Fly   482 RRSESYEKIEMTARTRPDLGGGASCGGGSATGAGLFHDAEEQGYLRAAHTPLNDNDAGQAAAIVN 546
            ..|.:.|.|:|      |.....:..|.|..|        |.|.:..:   |.|:::....:...
Zfish   551 AASGTMEAIQM------DENVSTTHAGTSIPG--------ECGMMLPS---LRDHNSTYKPSSYR 598

  Fly   547 P--SAGSAQRRNGDYLH---------------VSTHCDDEEEDQQL 575
            |  ||..|:...|:.||               :.||..::.::.|:
Zfish   599 PAHSAPWAENNIGNSLHRSRPMTISTIPEPYLIKTHTKEKVQETQI 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_523575.1 LRR <98..>267 CDD:443914 65/238 (27%)
leucine-rich repeat 112..137 CDD:275380 8/24 (33%)
leucine-rich repeat 138..161 CDD:275380 9/22 (41%)
leucine-rich repeat 162..185 CDD:275380 9/22 (41%)
leucine-rich repeat 186..209 CDD:275380 12/22 (55%)
leucine-rich repeat 210..234 CDD:275380 10/45 (22%)
leucine-rich repeat 235..258 CDD:275380 7/22 (32%)
LRRCT 267..316 CDD:214507 18/50 (36%)
Ig 331..428 CDD:472250 29/96 (30%)
Ig strand B 335..339 CDD:409562 0/3 (0%)
Ig strand C 348..352 CDD:409562 1/3 (33%)
Ig strand E 394..398 CDD:409562 2/3 (67%)
Ig strand F 408..413 CDD:409562 3/4 (75%)
Ig strand G 421..424 CDD:409562 1/2 (50%)
lrrc4.2NP_001093494.1 leucine-rich repeat 71..94 CDD:275380 8/24 (33%)
LRR <72..295 CDD:443914 61/224 (27%)
leucine-rich repeat 95..118 CDD:275380 9/22 (41%)
leucine-rich repeat 119..142 CDD:275380 9/22 (41%)
leucine-rich repeat 143..166 CDD:275380 12/22 (55%)
leucine-rich repeat 167..191 CDD:275380 10/23 (43%)
leucine-rich repeat 192..213 CDD:275380 0/20 (0%)
leucine-rich repeat 214..237 CDD:275380 7/22 (32%)
leucine-rich repeat 238..261 CDD:275380 1/22 (5%)
leucine-rich repeat 262..283 CDD:275380 1/20 (5%)
PCC 266..>349 CDD:188093 23/83 (28%)
IG_like 353..435 CDD:214653 29/103 (28%)
Ig strand B 364..368 CDD:409353 0/3 (0%)
Ig strand C 375..379 CDD:409353 1/3 (33%)
Ig strand E 401..405 CDD:409353 1/11 (9%)
Ig strand F 415..420 CDD:409353 3/4 (75%)
Ig strand G 428..431 CDD:409353 1/2 (50%)

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