DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek3 and lrrc24

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:XP_009297158.1 Gene:lrrc24 / 565790 ZFINID:ZDB-GENE-060503-496 Length:692 Species:Danio rerio


Alignment Length:579 Identity:148/579 - (25%)
Similarity:216/579 - (37%) Gaps:125/579 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 LHLLLWLLCCCSQLGQLRAECPAVCECKWKSGKESVLCLNANLTHIPQPLDAGTQLLDLSGNEIQ 123
            |.|:|..||..|      ..||:.|.|.    ..:|.|.:..:..|||.:..|||.:.|..|.|.
Zfish   108 LVLMLAQLCSTS------LACPSGCRCY----SLTVECGSIGIKEIPQGITQGTQTIFLQDNAIG 162

  Fly   124 LIPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSAIPSLALYHVSELRE 188
            .|.....  :.|..|..:||....:..:|..|||.|..|:||.|:.|.:..|.:.....:..||.
Zfish   163 QIRQRDL--SDLGQLHYLYLQNNSISTLEPGAFRSLGLLLELALNGNRIHLITADVFRGLDHLRI 225

  Fly   189 LRLSGNPILRVPDDAFGHVPQLVKLELSDCRLSHIAVRAFAGLESSLEWLKLDGNRLSEVRSGTI 253
            |.|:||.|.|:.|..|..:.:|.:|.|.:..|..:..:|..|| |||..|.|..|.|..:...::
Zfish   226 LYLAGNQINRLEDYTFRGLQRLQELHLQENVLEVLGDQALVGL-SSLALLDLSRNNLRTLSPASL 289

  Fly   254 TSLASLHGLELARNTWNCSCSLRPLRAWMLQ--QNIPSGIP--PTCESPPRLSGRAWDKLDVDDF 314
            ..|.||..|.:..|.|.|.|:|..||.|:.:  |.:.|...  ..|..|||||..:..::..:..
Zfish   290 KPLVSLQVLRVTDNPWRCDCALHWLRGWINEEGQRLLSSAERRMLCAEPPRLSHLSLVEVPPNSL 354

  Fly   315 ACVPQIVATDTTAHGVE-GRNITMSCYVEGVPQPAVKWLLKNRLIANLS-------AGGDGDSDS 371
            .|:|.:|..:.:...|. |.::.:||...|.|||.|.|...:...|.||       .|.|||:.:
Zfish   355 VCIPPVVQLEPSHLTVRLGESLRVSCQASGYPQPQVTWRKASHGKAQLSPRGLVQEVGMDGDTRN 419

  Fly   372 EPRTAAATQG--------------------RKTY---VVNMLRNASNLTILTADMQDAGIYTCAA 413
            ..|...|..|                    |:.:   ..:.:...||:|:     ..||.|.|.|
Zfish   420 GGRLVTARPGGKGGPSSHGPIRGGADDGADRENFDPDTGSGMLFLSNVTV-----AHAGRYECEA 479

  Fly   414 ENKAGKVEASVTLA----------------------------VSRRPPEAPWGVRIILLGAVAAL 450
            .|..|....:..|:                            ||:.|......:....||.....
Zfish   480 WNPGGVARVTFHLSVNMSSSSSRSEIWPRLHSSSYYHPSSVDVSQEPLYELESMDFNALGTATQT 544

  Fly   451 LLVGGSSF----AAICLCSLQRRRKLRL-------------------WNSVPPV------RRSES 486
            .:..|.|.    |.:.||.:..|.:.|.                   ::..|..      .|.|.
Zfish   545 AIAVGISLLALTALLLLCMIYSRHRQRQKEEGGYGASKEESILYVNDYSDGPTTFAQLEEYRDER 609

  Fly   487 YEKIEMTARTRPDLGGGASC-GGGSATGAGLFHDAEEQGYLRAAHTPLNDNDAGQAAAI 544
            ..::.:..|.:|.|.....| ..||||    ...:|.||.|    ||      |:|..|
Zfish   610 GHEMYVLNRAKPVLAPQPMCIQQGSAT----LKASECQGVL----TP------GRAGGI 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 50/156 (32%)
leucine-rich repeat 112..137 CDD:275380 7/24 (29%)
LRR_8 137..196 CDD:290566 20/58 (34%)
leucine-rich repeat 138..161 CDD:275380 8/22 (36%)
leucine-rich repeat 162..185 CDD:275380 6/22 (27%)
LRR_8 184..245 CDD:290566 23/60 (38%)
leucine-rich repeat 186..209 CDD:275380 10/22 (45%)
leucine-rich repeat 210..234 CDD:275380 7/23 (30%)
leucine-rich repeat 235..258 CDD:275380 6/22 (27%)
LRRCT 267..316 CDD:214507 16/52 (31%)
IG_like 328..428 CDD:214653 32/158 (20%)
Ig 335..425 CDD:143165 29/119 (24%)
lrrc24XP_009297158.1 leucine-rich repeat 151..174 CDD:275378 7/24 (29%)
LRR_8 174..257 CDD:290566 27/82 (33%)
LRR_4 174..238 CDD:289563 22/63 (35%)
leucine-rich repeat 175..222 CDD:275378 14/46 (30%)
leucine-rich repeat 199..218 CDD:275380 6/18 (33%)
LRR_8 222..304 CDD:290566 28/82 (34%)
LRR_4 222..258 CDD:289563 13/35 (37%)
leucine-rich repeat 223..246 CDD:275378 10/22 (45%)
leucine-rich repeat 247..294 CDD:275378 15/47 (32%)
leucine-rich repeat 295..307 CDD:275378 4/11 (36%)
LRRCT 303..356 CDD:214507 16/52 (31%)
IG_like 365..494 CDD:214653 32/133 (24%)
Ig 376..491 CDD:143165 29/119 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574240
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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