DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek3 and lrit3a

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:NP_001122166.1 Gene:lrit3a / 558559 ZFINID:ZDB-GENE-080723-63 Length:636 Species:Danio rerio


Alignment Length:485 Identity:111/485 - (22%)
Similarity:186/485 - (38%) Gaps:123/485 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LLLWLLCCCSQLGQLRAECPAVCECKWK-----SGKESVLCLNANLTHIP--QPLDAGTQLLDLS 118
            |:..:|..|..:.|  ..||:.|.|.:.     :|..||||.:.:::.||  .|||.        
Zfish     5 LVAQVLLGCWSVAQ--PFCPSQCTCVYHGRSDGTGSRSVLCNDPDMSDIPVNVPLDT-------- 59

  Fly   119 GNEIQLIPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSAIPSLALYHV 183
                                .|:.:.:..:|.:...||..|..|..|.::.|.::::...:.|::
Zfish    60 --------------------VKLRVEKTAVRRVPTEAFYYLSELRYLWITYNSITSVDPGSFYNL 104

  Fly   184 SELRELRLSGNPILRVPDDAFGHVPQLVKLELSDCRLSHIAVRAFAGLESSLEWLKLDGNRLSEV 248
            ..|.||||.||.|...|.::...:|.|..|:|.:.||:.:.|.| |....::.:|.:..|:|:.:
Zfish   105 KVLHELRLDGNMIATFPWESLKEMPSLKTLDLHNNRLTSVPVEA-APYLINITYLDISSNKLTTL 168

  Fly   249 RSGTITSLASLHGLELARNT------------WNCSCSLRPLRAWMLQQNIPSGIPP-------T 294
            .|..:.......|::.:.||            |.|.|.:..|    ::.:..:|||.       |
Zfish   169 PSDLVDIWPPFSGIQPSANTSQKTVLGLQDNPWYCDCRISKL----IELSKMAGIPVVLMDQVLT 229

  Fly   295 CESPPRLSGRAWDKLDVDDFACV-PQIVATDTTAHGVEGRNITMSCYVEGVPQPAVKWLLKNRLI 358
            |..|..|||..:.:.::|.  || |.::.:.|......|.|:.:.|...|.|.|.:.|...:..:
Zfish   230 CSGPEHLSGVLFQRAELDQ--CVKPTVMTSATKITSPLGSNVLLRCDANGFPTPTLLWTTADGSV 292

  Fly   359 AN----LSAGGDGDSDSEPRTAAATQGRKTYVVNMLRNASNLTILTADMQDAGIYTCAAENKAGK 419
            .|    ..:.|:|                       ...|.|::.:...:|||.|.|.|:|.||.
Zfish   293 VNNTVVQESPGEG-----------------------VRWSILSLHSIVFKDAGDYRCKAKNVAGN 334

  Fly   420 VEASVTLAVSRRPPEAPWGVRIILLGAVAALLLVGGSSFAAICLCSLQRRR--------KLRLWN 476
            .||.:||:|....|..|                     |..|.:......:        |:.|:.
Zfish   335 AEAYITLSVDGVQPTTP---------------------FPPINITKQPEDQPTTTFTPTKMPLFT 378

  Fly   477 SVPPV---RRSESYEKIEMTARTRPDLGGG 503
            |:.|:   .|........:|.|..|..|||
Zfish   379 SLSPITITTRPVMTTMPPLTTRKSPIPGGG 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 32/156 (21%)
leucine-rich repeat 112..137 CDD:275380 0/24 (0%)
LRR_8 137..196 CDD:290566 16/58 (28%)
leucine-rich repeat 138..161 CDD:275380 5/22 (23%)
leucine-rich repeat 162..185 CDD:275380 4/22 (18%)
LRR_8 184..245 CDD:290566 20/60 (33%)
leucine-rich repeat 186..209 CDD:275380 9/22 (41%)
leucine-rich repeat 210..234 CDD:275380 8/23 (35%)
leucine-rich repeat 235..258 CDD:275380 4/22 (18%)
LRRCT 267..316 CDD:214507 16/67 (24%)
IG_like 328..428 CDD:214653 25/103 (24%)
Ig 335..425 CDD:143165 21/93 (23%)
lrit3aNP_001122166.1 LRR_8 81..141 CDD:290566 17/59 (29%)
leucine-rich repeat 83..106 CDD:275378 4/22 (18%)
LRR_4 107..145 CDD:289563 15/37 (41%)
leucine-rich repeat 107..130 CDD:275378 9/22 (41%)
LRR_8 129..>171 CDD:290566 12/42 (29%)
LRR_4 129..170 CDD:289563 12/41 (29%)
leucine-rich repeat 131..154 CDD:275378 8/23 (35%)
leucine-rich repeat 155..168 CDD:275378 3/12 (25%)
TPKR_C2 199..249 CDD:301599 14/55 (25%)
Ig 252..343 CDD:299845 27/113 (24%)
IG_like 261..343 CDD:214653 25/104 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574223
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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