DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek3 and lrfn2b

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:XP_009292765.1 Gene:lrfn2b / 558484 ZFINID:ZDB-GENE-121214-111 Length:781 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064
leucine-rich repeat 112..137 CDD:275380
LRR_8 137..196 CDD:290566
leucine-rich repeat 138..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380
LRR_8 184..245 CDD:290566
leucine-rich repeat 186..209 CDD:275380
leucine-rich repeat 210..234 CDD:275380
leucine-rich repeat 235..258 CDD:275380
LRRCT 267..316 CDD:214507
IG_like 328..428 CDD:214653
Ig 335..425 CDD:143165
lrfn2bXP_009292765.1 LRR_RI 27..>209 CDD:238064
LRR_8 52..112 CDD:290566
leucine-rich repeat 54..77 CDD:275380
leucine-rich repeat 78..101 CDD:275380
LRR_8 101..161 CDD:290566
LRR_4 102..141 CDD:289563
leucine-rich repeat 102..125 CDD:275380
leucine-rich repeat 126..149 CDD:275380
LRR_8 150..209 CDD:290566
leucine-rich repeat 151..174 CDD:275380
leucine-rich repeat 175..198 CDD:275380
leucine-rich repeat 235..246 CDD:275378
LRRCT 242..>274 CDD:214507
I-set 289..376 CDD:254352
Ig 303..376 CDD:299845
fn3 418..485 CDD:278470
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6336
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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