DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek3 and atk

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:NP_001262113.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster


Alignment Length:1050 Identity:211/1050 - (20%)
Similarity:347/1050 - (33%) Gaps:324/1050 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LHLHLLLWLLCCCSQLGQLRAECPAVCECKWKSGKESVLCLNAN-LTHIPQPLDAGTQL-----L 115
            :||..|..:....:||..:.|..|.:.|         .:.|..| :|.:|.......||     |
  Fly   499 IHLERLFEVDASYNQLKSVIAGLPRIVE---------RISLKGNQITSLPAAASKDLQLPNLRML 554

  Fly   116 DLSGNEIQLIPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSAIPSLAL 180
            |||.|.|:.:|...|..|  :.|:.:.||:..||.::..:|..:..|..|.|.:|.|......||
  Fly   555 DLSQNRIEQLPRHGFQGA--MELRVLSLAQNELRQLKDTSFIGIQRLELLHLQENQLGEADERAL 617

  Fly   181 YHVSELRELRLSGNPILRVPDDAFGHVPQLVKLELSDCRLSHIAVRAFAGLESSLEWLKLDGNRL 245
            ..::|||.|.|..|.:..:.|:.|.:..:|.:|:||...:..|:..|| ..:.|||:|.|.||.|
  Fly   618 LPLAELRNLNLQSNKLEAITDNFFSNNSRLEQLDLSRNLIRSISPTAF-DTQRSLEYLDLSGNAL 681

  Fly   246 SEVRSGTITSLASLHGLELARNTWNCSCSLRPLRAWMLQQNIPSGIPPTCESPPRLSGRAWDKLD 310
            .::..| :.:|.:|..::|:.|           :...:|.::..|.....|.  |||.....:|.
  Fly   682 LDISVG-LGNLNNLRDIDLSYN-----------QISRIQSDVIGGWRNVVEI--RLSNNLIVELQ 732

  Fly   311 VDDFACVPQIVATDTTAHGVEGRNITMSCYVEGVPQPAVKWLLKNRLI----------ANLSAGG 365
            ...|..:|::...|.:::  |.||:.... ::|:.:.....|..|:|:          .:|.|..
  Fly   733 QGTFRNLPKLQYLDLSSN--EIRNVEPGA-LKGLDELQEFVLADNKLVELKDHVFEELPSLLASH 794

  Fly   366 ---------DGDSDSEPRTAAATQGRKTYVVNM----LRNASNLTILTADMQDAGIYTCAA---- 413
                     ..:|.....:.........:..||    ||:..||.:|  |:...|:...:.    
  Fly   795 FQYNKLRYISPESFHNANSLVFLNLSNNHFRNMENIGLRSMRNLEVL--DLSTNGVKLVSTMPLK 857

  Fly   414 -----------ENKAGKVEASVTLAVSRRPPEAPWGVRIILL-----------------GAVAAL 450
                       .|:..:::.|        |.|....:|::.:                 |.: |:
  Fly   858 ALNWLVELKMDNNQICRIQGS--------PFETMPRLRVLSMRNNQLRSIKERTFRNVRGNI-AI 913

  Fly   451 LLVGGSSFAAICLCSLQRRRKLRLWNSVPPVRRSESYE-------KIEMTARTRPDLGGGASCGG 508
            |.|.|:...  |.|.:|       |.||.....:..|.       ::..:||....|..||...|
  Fly   914 LDVDGNPID--CNCEMQ-------WLSVWLQETNFPYPGPKCQDGRLLRSARMERSLCVGADIYG 969

  Fly   509 GSATGAGLFHDAEEQGYLRAAHTPLNDNDAGQAAAIVNPSAGSAQRRNGD--YLHVSTHCDDEEE 571
            ...|.........|.|.:.....|.:.||..:        ||...|..||  .:..|.:..|:..
  Fly   970 NERTDGNQLPLLNEHGDVFQRDLPDDFNDECE--------AGEGTRLPGDRPLVGESEYFYDQYV 1026

  Fly   572 DQQLHHHPQQQPASQHHPHPNQQQHQQRKGSQGHVVSASGANNSAPLEETDLHIPRLIDIGGTDS 636
            |      ..:.|.:.|                 ..:|.|......|                   
  Fly  1027 D------ATEAPDTTH-----------------SAISTSQRPKPTP------------------- 1049

  Fly   637 ASSSISSQVDAAARLAGYAGHTWKTTPIATTKINSPHSKPVTSAAPSSLNTQATPYAHYGNHPAD 701
               :|:|.:|.            ..|.:.|...|   .||    .|.|    .:|:..:| :|..
  Fly  1050 ---TINSNIDL------------NNTILHTKYFN---RKP----QPGS----GSPFTFFG-YPLP 1087

  Fly   702 EMATSVFCSEG-----QESDLFDSNYPDLLDIAKYAVAQ-AQQEGRGQGYAQATTTPNGGLCTLP 760
            .::...|...|     |.:|..| :.|     |.:.:|. :...|||:   .....||..     
  Fly  1088 SVSLGRFFGFGDRGRKQRTDSND-DMP-----ATHRMAHISLPSGRGK---TRMYQPNSA----- 1138

  Fly   761 RKLKTSGKYFRNSSDSQSPLLADNSSKYGSSTLGDGSFLNEAMGLGRRYSAESSYANYSSTATYT 825
                ...||.::....:...:|.|......||..               |.|.:.:|.|.:|..|
  Fly  1139 ----EFEKYLKDQQKQEKLNIARNRYVDTDSTTS---------------SMEDALSNESGSAATT 1184

  Fly   826 GGGQRA----------NSFLNLVQSGAHQGKLLPSH------------------------LGQKP 856
            .|..|.          ..|..:|.  ||.|..:|.|                        :||:.
  Fly  1185 VGVFRTTFREPSSIERGGFRPIVP--AHVGGFMPVHDPQQRRGLVEVVNITGNPSEIVQGIGQRK 1247

  Fly   857 SLPSSPVQHQRSLSSAATPLLDFSALASRAAGAANTSVAAYDYHAAQLERFLEEYRNLQDQLCKM 921
            .:|         :|:.|.|      ..::::| .::..|.|:                      :
  Fly  1248 FIP---------ISTQARP------KPTKSSG-ESSETATYE----------------------V 1274

  Fly   922 KETCDTIRKKETPL--RVAIGQSAAQLADPVMYSAASHSPKPPATSNLKTKTLLPGQPPD----- 979
            .||...| ...|||  |:|...:.|........:..|.:...||.:|..:.|.|..|..|     
  Fly  1275 TETTPDI-TTTTPLMQRIATSTTKASTTTTRSTTTTSTTQVTPAENNASSSTELDSQYDDEDLEA 1338

  Fly   980 -------PPP 982
                   |||
  Fly  1339 QSVTLLRPPP 1348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 51/161 (32%)
leucine-rich repeat 112..137 CDD:275380 11/29 (38%)
LRR_8 137..196 CDD:290566 19/58 (33%)
leucine-rich repeat 138..161 CDD:275380 6/22 (27%)
leucine-rich repeat 162..185 CDD:275380 7/22 (32%)
LRR_8 184..245 CDD:290566 22/60 (37%)
leucine-rich repeat 186..209 CDD:275380 7/22 (32%)
leucine-rich repeat 210..234 CDD:275380 7/23 (30%)
leucine-rich repeat 235..258 CDD:275380 9/22 (41%)
LRRCT 267..316 CDD:214507 9/48 (19%)
IG_like 328..428 CDD:214653 21/137 (15%)
Ig 335..425 CDD:143165 18/127 (14%)
atkNP_001262113.1 leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
LRR_8 183..244 CDD:290566
leucine-rich repeat 185..209 CDD:275380
LRR_4 209..247 CDD:289563
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..259 CDD:275380
LRR_RI 250..492 CDD:238064
LRR_8 259..318 CDD:290566
leucine-rich repeat 260..283 CDD:275380
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..359 CDD:275380
leucine-rich repeat 334..348 CDD:275378
LRR_8 358..418 CDD:290566
leucine-rich repeat 360..383 CDD:275380
leucine-rich repeat 384..407 CDD:275380
LRR_8 406..466 CDD:290566
leucine-rich repeat 408..431 CDD:275380
leucine-rich repeat 432..455 CDD:275380
LRR_RI 447..705 CDD:238064 64/229 (28%)
LRR_8 454..514 CDD:290566 3/14 (21%)
leucine-rich repeat 456..476 CDD:275380
leucine-rich repeat 480..501 CDD:275380 0/1 (0%)
leucine-rich repeat 505..517 CDD:275378 2/11 (18%)
leucine-rich repeat 525..550 CDD:275380 7/33 (21%)
LRR_8 549..609 CDD:290566 19/61 (31%)
leucine-rich repeat 551..574 CDD:275380 9/24 (38%)
leucine-rich repeat 575..598 CDD:275380 6/22 (27%)
leucine-rich repeat 599..622 CDD:275380 7/22 (32%)
LRR_8 622..681 CDD:290566 22/59 (37%)
leucine-rich repeat 623..646 CDD:275380 7/22 (32%)
LRR_RI 647..896 CDD:238064 54/276 (20%)
leucine-rich repeat 647..670 CDD:275380 7/23 (30%)
leucine-rich repeat 671..693 CDD:275380 9/22 (41%)
leucine-rich repeat 694..717 CDD:275380 5/33 (15%)
LRR_8 716..776 CDD:290566 14/64 (22%)
leucine-rich repeat 718..741 CDD:275380 6/24 (25%)
leucine-rich repeat 742..763 CDD:275380 4/23 (17%)
LRR_8 765..824 CDD:290566 6/58 (10%)
leucine-rich repeat 766..789 CDD:275380 3/22 (14%)
leucine-rich repeat 790..813 CDD:275380 3/22 (14%)
leucine-rich repeat 814..835 CDD:275380 4/20 (20%)
leucine-rich repeat 838..861 CDD:275380 4/24 (17%)
LRR_8 862..921 CDD:290566 10/67 (15%)
leucine-rich repeat 862..885 CDD:275380 4/30 (13%)
leucine-rich repeat 886..906 CDD:275380 1/19 (5%)
TPKR_C2 919..>946 CDD:301599 7/35 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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