DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek3 and Slitrk3

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:NP_001344780.1 Gene:Slitrk3 / 386750 MGIID:2679447 Length:980 Species:Mus musculus


Alignment Length:835 Identity:176/835 - (21%)
Similarity:264/835 - (31%) Gaps:285/835 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SAQRRTLATKVRRKGPRP---QRRLH-----PPL-----RPRLPLHLHLLLWLLCCCSQLGQLRA 77
            |:.::...||..|. |||   .:.|:     ||:     ||.:|:                    
Mouse   329 SSNKQPKPTKQPRT-PRPPSTSQALYPGPNQPPIAPYQTRPPIPI-------------------- 372

  Fly    78 ECPAVCECKWKSGK--ESVLCLNANLTHI----PQPLDAGTQLLDLSGNEIQLIPDDSFATAQLL 136
            .||..|.|......  .:|.|......:|    |:||:|  :.|.||.|.||.|....|.....|
Mouse   373 ICPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNA--KKLYLSSNLIQKIYRSDFWNFSSL 435

  Fly   137 NLQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSAIPSLALYHVSELRELRLSGNPILRVPD 201
            :|  ::|....:..::..||..|.||..|.|:.|.:..:.......:..|..|....|.|..:..
Mouse   436 DL--LHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQP 498

  Fly   202 DAFGHVPQLVKLELSDCRLSHIAVRAFAGLESSLEWLKLDGNRLSEVR-SGTITSLASLHGLELA 265
            .||..:|.|..|.|::..|..:...||||  :||..|.|..|....:. :|.:..|.::..::|.
Mouse   499 AAFSLMPNLKLLFLNNNLLRTLPTDAFAG--TSLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLN 561

  Fly   266 RNTWNCSCSLRPLRAWMLQQNIPSGIPPT-CESPPRLSGRAWDKLDVDDFACVPQIVATDTTAHG 329
            .|.|:|:|.|.|.:.|:...:..|.:... |.:|..|:.|  |...::.....|:::      | 
Mouse   562 ENPWDCTCDLVPFKQWIETISSVSVVGDVLCRTPENLTHR--DVRTIELEVLCPEML------H- 617

  Fly   330 VEGRNITMSCYVEGVPQPAVKWLLKNRLIANLSAGGDGDSDSEPRTAAATQGRKTYVVNMLRNAS 394
                          :.||                   |.|..:|                     
Mouse   618 --------------IAQP-------------------GPSPPQP--------------------- 628

  Fly   395 NLTILTADMQDAGIYTCAAENKAGKVEASVTLAVSRRPPEAPWGVRIILLGAVAALLLVGGSSFA 459
                  .|....|     ....|...|.|        ||..|..:.:::|   :.|:|...:.|.
Mouse   629 ------GDYHPNG-----GPTSASPYEFS--------PPGGPVPLSVLIL---SLLVLFFSAVFV 671

  Fly   460 AICLCS--LQRRRKLRLWNSVPPVRRSESYEKIEMTA------RTRPDLGG--GASCGGGSATGA 514
            |..|.:  |:||||     .:|  .||:..|.:::|.      |...|.||  |.|.|||..|.:
Mouse   672 AAGLFAYVLRRRRK-----KLP--FRSKRQEGVDLTGIQMQCHRLFEDSGGNSGGSGGGGRPTLS 729

  Fly   515 G-------------------------LFHDAEEQGYLRAAHTPLNDNDAG----QAAAIVNPSAG 550
            .                         ::...||:....:|.......|.|    |...:.....|
Mouse   730 SPEKAPPVGHVYEYIPHPVTQMCNNPIYKPREEEEVAASAAQDTGATDRGGPGTQPTGMAEVLLG 794

  Fly   551 S---AQRRNGDYLHVSTHCDDEEE------DQQL-------HHHPQQQPASQHHPHPNQQQHQQR 599
            |   |:....::.:..|..:.|:|      :.||       ||||        |||     |...
Mouse   795 SEQFAETPKENHSNYRTLLEKEKEWALAVSNSQLNTIVTVNHHHP--------HPH-----HSAV 846

  Fly   600 KGSQGHVVSASGANNSAPLEETDLHIPR----LIDIGGTDSASSSI--SSQVDAAARLAGYAGHT 658
            .|     ||..|......|.....|...    |...||.....|.:  ..:...|....|:....
Mouse   847 GG-----VSGVGGGTGGDLAGFRHHEKNGGVVLFPPGGGCGGGSLLLDRERPQPAPCTVGFVDCL 906

  Fly   659 WKTTPIATTKINSPHSKPVTSAAPSSLNTQATPYAHYGNHPADEMATSVFCSEGQESDLFDSNYP 723
            :.|.|    |:...|..|                                  .|.:       ||
Mouse   907 YGTVP----KLKELHVHP----------------------------------PGMQ-------YP 926

  Fly   724 DLLDIAKYAVAQAQQEGR---------GQGYAQATTTPNGGLCTLPRKLKTSGKY 769
            ||           ||:.|         |:|:.. ..||......|..||:|...|
Mouse   927 DL-----------QQDARLKETLLFSAGKGFTD-HQTPKSDYLDLRAKLQTKPDY 969

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 43/157 (27%)
leucine-rich repeat 112..137 CDD:275380 8/24 (33%)
LRR_8 137..196 CDD:290566 13/58 (22%)
leucine-rich repeat 138..161 CDD:275380 5/22 (23%)
leucine-rich repeat 162..185 CDD:275380 4/22 (18%)
LRR_8 184..245 CDD:290566 20/60 (33%)
leucine-rich repeat 186..209 CDD:275380 6/22 (27%)
leucine-rich repeat 210..234 CDD:275380 8/23 (35%)
leucine-rich repeat 235..258 CDD:275380 6/23 (26%)
LRRCT 267..316 CDD:214507 13/49 (27%)
IG_like 328..428 CDD:214653 11/99 (11%)
Ig 335..425 CDD:143165 10/89 (11%)
Slitrk3NP_001344780.1 LRR 1 79..100
leucine-rich repeat 82..103 CDD:275380
LRR 2 103..124
leucine-rich repeat 104..127 CDD:275380
LRR_8 106..162 CDD:338972
LRR 3 127..148
leucine-rich repeat 128..151 CDD:275380
LRR_8 151..209 CDD:338972
LRR 4 151..172
leucine-rich repeat 152..175 CDD:275380
LRR 5 175..196
leucine-rich repeat 176..198 CDD:275380
LRR 6 198..219
leucine-rich repeat 199..403 CDD:275380 20/94 (21%)
leucine-rich repeat 225..301 CDD:275380
LRRCT 233..>271 CDD:214507
leucine-rich repeat 315..411 CDD:275380 23/102 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..361 9/32 (28%)
leucine-rich repeat 404..434 CDD:275380 12/31 (39%)
LRR 7 410..431 9/22 (41%)
LRR_8 434..493 CDD:338972 14/60 (23%)
LRR 8 434..455 5/22 (23%)
leucine-rich repeat 435..458 CDD:275380 6/24 (25%)
LRR 9 458..479 5/20 (25%)
leucine-rich repeat 459..482 CDD:275380 4/22 (18%)
LRR 10 482..503 6/20 (30%)
leucine-rich repeat 483..502 CDD:275380 5/18 (28%)
LRR 11 506..527 6/20 (30%)
leucine-rich repeat 507..529 CDD:275380 8/23 (35%)
LRR 12 529..550 6/20 (30%)
leucine-rich repeat 530..554 CDD:275380 6/23 (26%)
LRRCT 563..>598 CDD:214507 10/34 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 622..644 6/53 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 709..735 9/25 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 762..785 4/22 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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