DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek3 and lbk

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:NP_611091.2 Gene:lbk / 36788 FlyBaseID:FBgn0034083 Length:1252 Species:Drosophila melanogaster


Alignment Length:937 Identity:182/937 - (19%)
Similarity:273/937 - (29%) Gaps:413/937 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 SGKESVLCLNANLTHIPQPLDAGTQL---LDLSGNEIQLIPDDSFATAQLLNLQKVYLARCHLRL 150
            ||.:.::..|.::|.|.....|...|   ||||.|::..|..:||..:.  ||..:.|:...:..
  Fly   337 SGLKHLVLANNHITSISSESLAALPLLRTLDLSRNKLHTIELNSFPKSN--NLVHLILSFNEITN 399

  Fly   151 IERHAFRKLINLVELDLSQNLLSAIP--------------------------------------- 176
            :..|:|..|.||.:|:||.|.||.:|                                       
  Fly   400 VNEHSFATLNNLTDLELSNNRLSTLPIRVFKNLNQLKKLALNFNQLEINWSTFRGLESMKNLQLK 464

  Fly   177 -----------------------------SLA---LYHVSELRELRLSGNPILRVPDDAFGHVPQ 209
                                         ||:   |:::::||.|.||.|.|.|:..|.:.....
  Fly   465 SNKIRALQDGVFYVMHKIETIDLAMNQISSLSRQGLFNLTKLRHLNLSFNAISRIEVDTWEFTQS 529

  Fly   210 LVKLELS------------------------------------DC------------RLSHI--- 223
            |..|:||                                    ||            |||.|   
  Fly   530 LEVLDLSNNAINEFKPQHLDCLHRLKTLNLAHNRLQYLQENTFDCVKNLEELNLRRNRLSWIIED 594

  Fly   224 --AVRAFAGLESSLEWLKLDGNRLSEVRSGTITSLASLHGLELARN------------------- 267
              |...|.||. .|..|.|.||.|.::.:..::.|.:|..|.|..|                   
  Fly   595 QSAAAPFKGLR-KLRRLDLHGNNLKQISTKAMSGLNNLEILNLGSNALASIQVNAFEHMLRLNKL 658

  Fly   268 -----TWNCSCSLRPLRAWMLQQNIPSGIPPTCESPPRLSGRAWDKLDVDDFACV----PQIVAT 323
                 .:.|.|.|...:.|:..:.........|..|..|..|....|...:..||    |::...
  Fly   659 VFKSLNFICDCDLVWFQQWLKNRFPQQAEHAVCGYPEHLLDRHLKSLSSSELVCVDSPKPRVEQE 723

  Fly   324 DTTAHGVEGRNITMSCYVEGVPQPA---------VKWLLKNRLIANLSAGGDGDS-DSEPRTAAA 378
            ......|...|||:.| :...|..|         :||...|:.:....|..||.| :::.|...:
  Fly   724 PDDMLAVNAANITLEC-IASSPTAASLAAADELKIKWRHDNQHVQERPAVHDGASTETQIRHDLS 787

  Fly   379 TQ------------------GRKTYVVN--------------------MLRNASNLTILTADM-- 403
            |.                  ||...||:                    .|:..||||:...:|  
  Fly   788 TNQTSIYGYLRLTNVTYESAGRYQCVVSNAFGTTYAQKFKISIGIHPTFLQVPSNLTLDAGEMAR 852

  Fly   404 -----------------------------------------------QDAGIYTCAAENKAGKVE 421
                                                           .|:|||||.|.:.||:::
  Fly   853 LVCSASGDPTPEIALQKFGGSEFPAATERRLQVIREENAFLITNAKPSDSGIYTCTALSAAGEIK 917

  Fly   422 ASVTLAVSRRP-------------------------------------------------PEAPW 437
            .:.||.|:.:|                                                 |.||.
  Fly   918 VNATLVVNDKPQPSIPLVHQEVVVGRTCVLQCLSETANADFELEHPHREWFKENKPIHISPTAPD 982

  Fly   438 GVR---------IILLGAVA--------------------------------ALLLVGGSSFAAI 461
            |.|         :::|.|.:                                .:||||..:...|
  Fly   983 GDRYYFSNNKELLVILNAQSNDAGHFRCEITDNSRTFTLQSELVVVKENLNWVVLLVGIITVTVI 1047

  Fly   462 CL--------CSLQ-RRRKLRLWNSVPPVRRSESYEKIEMTARTRPDLGGGASCGGGSATGAGLF 517
            |:        |:|: :::|||:  |:...|.|     .::..|:..|||    |....|....|.
  Fly  1048 CVVVDCCIIWCTLRYQKKKLRM--SLAAERHS-----TQLRPRSLADLG----CSYDEANHRRLT 1101

  Fly   518 --------HDAEEQG----YLRAA-------HTPLNDNDAGQAAAIVNPSAGSAQRRNGDYLHVS 563
                    ....|||    |||..       |....|:..|..||:         :|..|...|:
  Fly  1102 VMSTPPSEQRCLEQGLTLSYLRQTDLEAQQDHLSSKDSGTGSDAAV---------KRTLDDFEVA 1157

  Fly   564 T-----HCDDEEEDQQLHHHPQQQPASQHHPH------PNQQ---QHQQRKGSQGHVVSASGANN 614
            .     |.|||||::....:.:.:|....|.:      |.|.   |:.......|.:..|.|.|.
  Fly  1158 MPSHKHHTDDEEEEEVEEVYEENEPPYIKHTYEVNYAEPEQHLFLQNNNHNYDGGGIGVAGGVNK 1222

  Fly   615 SAPLEETDLHIPRLIDIGGTDSASSSI 641
            ..|..     :.|....|.:.|..|||
  Fly  1223 MVPNA-----LLRKCSAGASGSNYSSI 1244

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 61/283 (22%)
leucine-rich repeat 112..137 CDD:275380 9/27 (33%)
LRR_8 137..196 CDD:290566 24/129 (19%)
leucine-rich repeat 138..161 CDD:275380 5/22 (23%)
leucine-rich repeat 162..185 CDD:275380 11/93 (12%)
LRR_8 184..245 CDD:290566 28/113 (25%)
leucine-rich repeat 186..209 CDD:275380 9/22 (41%)
leucine-rich repeat 210..234 CDD:275380 14/76 (18%)
leucine-rich repeat 235..258 CDD:275380 7/22 (32%)
LRRCT 267..316 CDD:214507 10/72 (14%)
IG_like 328..428 CDD:214653 37/196 (19%)
Ig 335..425 CDD:143165 33/186 (18%)
lbkNP_611091.2 LRR_RI <275..446 CDD:238064 30/110 (27%)
leucine-rich repeat 293..316 CDD:275380
LRR_8 316..373 CDD:290566 12/35 (34%)