DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek3 and Lrg1

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:XP_038939951.1 Gene:Lrg1 / 367455 RGDID:1359464 Length:342 Species:Rattus norvegicus


Alignment Length:301 Identity:80/301 - (26%)
Similarity:114/301 - (37%) Gaps:58/301 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPLRPRLPLHLHLLLWLLCCCSQLGQLRAE----CPAVCECKWKSGKESVLCLNANLTHIPQPLD 109
            |...|...:||.:..      |.|.||.|.    ||.:.|....|.:...|.... |..:|:   
  Rat    56 PSSLPADTVHLSVEF------SSLTQLPAAALQGCPGLQELHLSSNRLQELSPGL-LAPVPR--- 110

  Fly   110 AGTQLLDLSGNEIQLIPDDSFATAQLLN--------LQK--------------VYLARCHLRLIE 152
              .::|||:.|.::.:|...|.::..||        ||:              :.||...||.:.
  Rat   111 --LRVLDLTRNALRSLPPGLFRSSAALNTLVLRENQLQEASARWLQGLDALGYLDLAENRLRSLP 173

  Fly   153 RHAFRKLINLVELDLSQNLLSAIPSLALYHVSELRELRLSGNPILRVPDDAFGHVPQLVKLELSD 217
            ......|..|..|||..|||.::|...|.....|:.|.|.||.:.|:........|.|..|.|:|
  Rat   174 ARLLANLGALHTLDLGHNLLESLPEGFLRGPRRLQRLHLEGNRLQRLEAGLLAPQPFLGVLFLND 238

  Fly   218 CRLSHIAVRAFAGLESSLEWLKLDGNRLSEVRSGTITSLA-----SLHGLELARNTWNCSCSLRP 277
            .:|:.:|..:|.||: .|:.|.|..|.||....|....|.     ...|.:::.|.|.|...|..
  Rat   239 NQLTAVAADSFRGLK-QLDMLDLSNNSLSSTPPGLWAFLGRPTRDMQDGFDVSHNPWVCDKDLVD 302

  Fly   278 LRAW-------MLQQNIPSGIPPTCESPPRLSGRAWDKLDV 311
            |..|       |..||     ...|..|..:.|:.  .|||
  Rat   303 LCRWLAANRHKMFSQN-----DTLCAGPEAVRGQR--LLDV 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 49/183 (27%)
leucine-rich repeat 112..137 CDD:275380 6/24 (25%)
LRR_8 137..196 CDD:290566 22/80 (28%)
leucine-rich repeat 138..161 CDD:275380 7/36 (19%)
leucine-rich repeat 162..185 CDD:275380 9/22 (41%)
LRR_8 184..245 CDD:290566 20/60 (33%)
leucine-rich repeat 186..209 CDD:275380 6/22 (27%)
leucine-rich repeat 210..234 CDD:275380 9/23 (39%)
leucine-rich repeat 235..258 CDD:275380 8/27 (30%)
LRRCT 267..316 CDD:214507 15/52 (29%)
IG_like 328..428 CDD:214653
Ig 335..425 CDD:143165
Lrg1XP_038939951.1 PRK15370 <55..>293 CDD:185268 65/249 (26%)
leucine-rich repeat 65..86 CDD:275380 8/26 (31%)
leucine-rich repeat 87..110 CDD:275380 4/23 (17%)
leucine-rich repeat 111..134 CDD:275380 6/22 (27%)
leucine-rich repeat 135..158 CDD:275380 4/22 (18%)
leucine-rich repeat 159..182 CDD:275380 5/22 (23%)
leucine-rich repeat 183..206 CDD:275380 9/22 (41%)
leucine-rich repeat 207..230 CDD:275380 6/22 (27%)
leucine-rich repeat 231..254 CDD:275380 9/23 (39%)
leucine-rich repeat 255..278 CDD:275380 8/22 (36%)
PCC 259..>339 CDD:188093 22/85 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334984
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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