DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek3 and lgi1a

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:NP_955921.2 Gene:lgi1a / 323011 ZFINID:ZDB-GENE-030131-1731 Length:537 Species:Danio rerio


Alignment Length:474 Identity:93/474 - (19%)
Similarity:157/474 - (33%) Gaps:146/474 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LLWLLCCCSQLGQLR--AECPAVCECKWKSGKESVLCLNANLTHIPQPLDAGTQLLDLSGNEIQL 124
            :|.:|.....||..|  :.|||.|.|    .|::.||  ||...||:.                 
Zfish     9 VLCVLLAALVLGGRRRSSRCPAPCTC----SKDNALC--ANTGAIPRS----------------- 50

  Fly   125 IPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSAIPSLALYHVSELREL 189
            .|.|                                 ::.|...::..:.||..:..|...|..|
Zfish    51 FPQD---------------------------------VISLSFVKSGFTEIPKESFIHTPALHLL 82

  Fly   190 RLSGNPILRVPDDAFGHVPQLVKLELSDCRLSHIAVRAFAGLESSLEWLKLDGNRLSEVRSGTIT 254
            ..:.|....:.:|||..:|.|..|.:.:.::..|:..||.||:|.:. |.|..|.|..:......
Zfish    83 LFTANSFDSINEDAFLGLPHLEYLFIENNQIKSISPFAFRGLKSLIH-LSLAYNNLETLPKDLFK 146

  Fly   255 SLASLHGLELARNTWNCSCSLRPLRAWMLQQNIPSGIPPT-----CESPPRLSGRAWDKLDVDDF 314
            .:.:|..::|..|.::|.|.|:.|..||...|      .|     |..|....|:..:.|:...|
Zfish   147 GMEALTKVDLRGNLFSCDCKLKWLVDWMFHTN------ATVDQIFCNGPEGYQGKKINDLEAQTF 205

  Fly   315 ACVPQIVATDTTAHGVEGRNITMSCYVEGVPQPAVKWLLKNRLIANLS------AGGDGDSDSEP 373
            .|    :.||.|                         |||:....::|      ||......::|
Zfish   206 DC----ITTDFT-------------------------LLKSLEFQSISVEAFSFAGDQFVVFAQP 241

  Fly   374 RTAAATQGRKTYVVNMLRNASNLT-----ILTADMQDAGIYTCAAE--------------NKAGK 419
            .:...:.....:|....||..|:|     |....:.|:.::...|:              ||..:
Zfish   242 FSGRCSFMEWDHVQMEFRNFDNITSTSTVICKPLVIDSQLFIIVAQLFGGSHIFKRDVSANKFIR 306

  Fly   420 VEASVTLAVSRRPPEAPWGVRIILLGAVAALLLVGGSSFAAICLCSLQRRRKLRLWN-------- 476
            :: .:.:...|:|.:             ..:..|.|.||..|...|......:..||        
Zfish   307 IQ-DIDILKIRKPND-------------VEIFEVDGESFFIIADSSKAGSTTIYKWNGNGFYSYQ 357

  Fly   477 SVPPVRRSESYEKIEMTAR 495
            |:.|..|....|.::::.:
Zfish   358 SLHPWHRDTDVEYLDISGK 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 27/156 (17%)
leucine-rich repeat 112..137 CDD:275380 2/24 (8%)
LRR_8 137..196 CDD:290566 7/58 (12%)
leucine-rich repeat 138..161 CDD:275380 0/22 (0%)
leucine-rich repeat 162..185 CDD:275380 4/22 (18%)
LRR_8 184..245 CDD:290566 18/60 (30%)
leucine-rich repeat 186..209 CDD:275380 6/22 (27%)
leucine-rich repeat 210..234 CDD:275380 7/23 (30%)
leucine-rich repeat 235..258 CDD:275380 4/22 (18%)
LRRCT 267..316 CDD:214507 14/53 (26%)
IG_like 328..428 CDD:214653 17/124 (14%)
Ig 335..425 CDD:143165 17/114 (15%)
lgi1aNP_955921.2 LRR_8 57..113 CDD:290566 13/55 (24%)
LRR_4 77..120 CDD:289563 10/42 (24%)
leucine-rich repeat 79..102 CDD:275378 6/22 (27%)
LRR_8 101..161 CDD:290566 16/60 (27%)
LRR_4 101..141 CDD:289563 13/40 (33%)
leucine-rich repeat 103..126 CDD:275378 7/22 (32%)
leucine-rich repeat 127..150 CDD:275378 4/23 (17%)
leucine-rich repeat 151..163 CDD:275378 3/11 (27%)
TPKR_C2 159..207 CDD:301599 14/53 (26%)
EPTP 211..252 CDD:281697 9/65 (14%)
EPTP 257..298 CDD:281697 7/40 (18%)
EPTP 303..349 CDD:281697 9/59 (15%)
EPTP 352..394 CDD:281697 4/25 (16%)
EPTP 399..441 CDD:281697
EPTP 444..485 CDD:281697
EPTP 490..530 CDD:281697
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574244
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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