DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek3 and Lrig3

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:NP_796126.4 Gene:Lrig3 / 320398 MGIID:2443955 Length:1117 Species:Mus musculus


Alignment Length:988 Identity:210/988 - (21%)
Similarity:314/988 - (31%) Gaps:289/988 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 WKSGKESVLCL-NANLTHIPQPLDAGTQL---LDLSGNEIQLIPDDSFATAQLLNLQKVYLARCH 147
            |......||.| :.|||.|.:....|..:   |.||.|.|..|..|::...|  .|.::.|...|
Mouse   260 WGLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQ--KLSELDLTFNH 322

  Fly   148 LRLIERHAFRKLINLVELDLSQNLLSAIPSLALYHVSELRELRLSGNPILRVPDD---AFGHVPQ 209
            |..::..:|..|..|..|.:..|.:|.|...|...::.|:.|.|..|.|....:|   ||..:.:
Mouse   323 LSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSGAFSGLDR 387

  Fly   210 LVKLELSDCRLSHIAVRAFAGLESSLEWLKLDGNRLSEVRSGTITSLASLHGLELARNTWNCSCS 274
            |.:|.|...|:..|..:|||||: :||.|.|.||.:..::|...:.:..|..|.|..::..|.|.
Mouse   388 LRQLILQGNRIRSITKKAFAGLD-TLEHLDLSGNAIMSLQSNAFSQMKKLQQLHLNTSSLLCDCQ 451

  Fly   275 LRPLRAWMLQQNIPSGIPPTCESPPRLSGRAWDKLDVDDFAC----VPQIVATDTTAHGVEGRNI 335
            ||.|..|:.:.|..|.:..:|..|..|.||:...:..|.|.|    .|||.....|...::|.::
Mouse   452 LRWLPQWVAENNFQSFVNASCAHPQLLKGRSIFTVSPDGFVCDDFPKPQITVQPETQSAIKGSDV 516

  Fly   336 TMSCYVEGVPQPAV--KWLLKNRLI--------ANLSAGG---------------DGDSDSEPRT 375
            :.:|.........:  .|...|..:        |:|.|.|               :..|:.:.:.
Mouse   517 SFTCSAASSSDSPMTFAWKKDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGKYQC 581

  Fly   376 AAATQGRKTY------VVNML----RNASNLTILTADM--------------------------- 403
            ..:.....:|      .:|||    :...:|||....|                           
Mouse   582 VISNHFGSSYSVKAKLTINMLPSFTKTPMDLTIRAGAMARLECAAVGHPAPQIAWQKDGGTDFPA 646

  Fly   404 ----------------------QDAGIYTCAAENKAGKVEASVTLAVSRRPP-EAPWGVRIILLG 445
                                  :|.|:|:|.|:|.||.|.|:.||.|...|. ..|...|.:..|
Mouse   647 ARERRMHVMPEDDVFFIVDVKIEDIGVYSCTAQNSAGSVSANATLTVLETPSFLRPLLDRTVTKG 711

  Fly   446 AVAALLLVGGSSFAAICLCSLQRRRKLRLWNSVPPVRRSESYEKIEMTARTRPDLGGG------- 503
            ..|.|..:.|.|                     ||.|.:.:.:...:....|.....|       
Mouse   712 ETAVLQCIAGGS---------------------PPPRLNWTKDDSPLVVTERHFFAAGNQLLIIV 755

  Fly   504 ---------ASCGGGSATGAGLFHDAEEQGYLRAAHTPLNDNDA-----------GQAA------ 542
                     .:|...:..|.       |:|.:|.:..|....|:           |.|.      
Mouse   756 DSDVSDAGKYTCEMSNTLGT-------ERGNVRLSVIPTPTCDSPHMTAPSLDGDGWATVGVVII 813

  Fly   543 AIVNPSAGSA----------QRRNGDYLHVSTHCDDEEEDQQLHHHPQQQP---ASQHHPHPNQQ 594
            |:|....|::          :|||.|       |.....|:.  :.|...|   :||......|.
Mouse   814 AVVCCVVGTSLVWVVIIYHTRRRNED-------CSITNTDET--NLPADIPSYLSSQGTLADRQD 869

  Fly   595 QH-QQRKGSQGHVVSASGANNSAPLEETDLHIPRLIDIGGTDSASSSISSQVDAAARLAGYAGHT 658
            .: ....||....|::||.....|..          |..||.....|..:.|:||          
Mouse   870 GYISSESGSHHQFVTSSGGGFFLPQH----------DGAGTCHFDDSSEADVEAA---------- 914

  Fly   659 WKTTPIATTKINSPHSKP-VTSAAPSSLNTQATPYAHYGNHPADEMATSVFCSEGQESDLFDSNY 722
                       :.|...| |.|..|..|....     |...|.:.....  ||....:.|.|...
Mouse   915 -----------SDPFLCPFVGSTGPVYLQGNL-----YSPDPFEVYLPG--CSSDPRTALMDHCE 961

  Fly   723 PDLLDIAKYAVAQAQQEGRGQGYAQATTTP-NGGLCTLP----RKLKTSGKYFRNSSDSQSPLLA 782
            ...:...:::.|:..:|            | ...|.::|    ||| |...|..|...:...|..
Mouse   962 SSYVKQDRFSCARPSEE------------PCERSLKSIPWPHSRKL-TDSTYPPNEGHTVQTLCL 1013

  Fly   783 DNSSKYGSSTLGDGSFLNEAMGLGRRYSAESSYANYSSTATYTGGGQRANSFLNLVQSGAHQGKL 847
            :.||                             .:: ||....|....:|||:     |.....|
Mouse  1014 NKSS-----------------------------VDF-STGPEPGSATSSNSFM-----GTFGKPL 1043

  Fly   848 LPSHL------GQKPSLPSSPVQHQRSLSSAATPLLDFSALASRAAGAANTSVAAYDYHAAQLER 906
            ...||      .|.|.....|. |.:||||   |.||..   |.......|.... :.|....::
Mouse  1044 RRPHLDAFSSSAQPPDCQPRPC-HGKSLSS---PELDSE---SEENDKERTDFRE-ENHRCTYQQ 1100

  Fly   907 FLEEYRNLQDQLC 919
            ....||....|.|
Mouse  1101 IFHTYRTPDCQPC 1113

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 49/162 (30%)
leucine-rich repeat 112..137 CDD:275380 8/27 (30%)
LRR_8 137..196 CDD:290566 16/58 (28%)
leucine-rich repeat 138..161 CDD:275380 6/22 (27%)
leucine-rich repeat 162..185 CDD:275380 6/22 (27%)
LRR_8 184..245 CDD:290566 24/63 (38%)
leucine-rich repeat 186..209 CDD:275380 8/25 (32%)
leucine-rich repeat 210..234 CDD:275380 10/23 (43%)
leucine-rich repeat 235..258 CDD:275380 7/22 (32%)
LRRCT 267..316 CDD:214507 15/48 (31%)
IG_like 328..428 CDD:214653 29/183 (16%)
Ig 335..425 CDD:143165 26/173 (15%)
Lrig3NP_796126.4 LRR 1 75..98
LRR_8 76..133 CDD:290566
leucine-rich repeat 76..99 CDD:275378
LRR_RI 81..324 CDD:238064 20/65 (31%)
LRR 2 99..120
leucine-rich repeat 100..146 CDD:275378
LRR_8 122..179 CDD:290566
LRR 3 122..143
LRR 4 146..168
leucine-rich repeat 147..168 CDD:275380
LRR_8 168..227 CDD:290566
leucine-rich repeat 169..192 CDD:275380
LRR 5 169..189
LRR 6 193..214
leucine-rich repeat 194..216 CDD:275380
LRR_8 215..275 CDD:290566 4/14 (29%)
LRR 7 216..237
leucine-rich repeat 217..240 CDD:275380