DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek3 and Chad

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:NP_062037.1 Gene:Chad / 29195 RGDID:2336 Length:358 Species:Rattus norvegicus


Alignment Length:341 Identity:86/341 - (25%)
Similarity:129/341 - (37%) Gaps:108/341 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LLLWLLCCCSQLGQLRAECPAVCECKWKSGKESVLCLNANLTHIPQPLDAGTQLLDLSGNEIQLI 125
            |||.|:.....|..| |.||..|.|  ....:.|:|....|..||: :...|:||:|..|...::
  Rat     5 LLLSLVFLAILLPAL-AACPQNCHC--HGDLQHVICDKVGLQKIPK-VSETTKLLNLQRNNFPVL 65

  Fly   126 PDDSFATAQLLNLQKVYLARCHLRLIERHAFR---KLI--------------------------- 160
            ..:||.|..  ||..::|..|::|.:...|||   :||                           
  Rat    66 AANSFRTVP--NLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLY 128

  Fly   161 ----------------------------------------------------------------- 160
                                                                             
  Rat   129 LDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLDDV 193

  Fly   161 -NLVELDLSQNLLSAIPSLALYHVSELRELRLSGNPILRVPDDAFGHVPQ-LVKLELSDCRLSHI 223
             ||.:..|.:|.||:.||.||..:..:.||:||.||:..:||:||....: |..|.|.:..|...
  Rat   194 ENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKF 258

  Fly   224 AVRAFAGLESSLEWLKLDGNRLSEVRSGTITSLASLHGLELARNTWNCSCSLRPLRAWMLQQNIP 288
            :..||||: ::|:.:.|:.|||:::.|  .....:|..|.|..|.|.|:|.||.||.|:..:.  
  Rat   259 SDAAFAGV-TTLKHVHLENNRLNQLPS--TFPFDNLETLTLTNNPWKCTCQLRGLRRWLEAKT-- 318

  Fly   289 SGIPPTCESPPRLSGR 304
            |....||.||.:..|:
  Rat   319 SRPDATCSSPAKFKGQ 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 55/253 (22%)
leucine-rich repeat 112..137 CDD:275380 8/24 (33%)
LRR_8 137..196 CDD:290566 25/154 (16%)
leucine-rich repeat 138..161 CDD:275380 9/118 (8%)
leucine-rich repeat 162..185 CDD:275380 9/22 (41%)
LRR_8 184..245 CDD:290566 21/61 (34%)
leucine-rich repeat 186..209 CDD:275380 10/22 (45%)
leucine-rich repeat 210..234 CDD:275380 8/23 (35%)
leucine-rich repeat 235..258 CDD:275380 6/22 (27%)
LRRCT 267..316 CDD:214507 15/38 (39%)
IG_like 328..428 CDD:214653
Ig 335..425 CDD:143165
ChadNP_062037.1 LRRNT 22..48 CDD:279764 9/28 (32%)
LRR 1 51..72 7/20 (35%)
leucine-rich repeat 52..75 CDD:275380 8/24 (33%)
LRR_8 74..134 CDD:290566 10/61 (16%)
LRR 2 75..96 7/20 (35%)
leucine-rich repeat 76..99 CDD:275380 7/22 (32%)
LRR_RI <89..281 CDD:238064 38/192 (20%)
LRR 3 99..120 2/20 (10%)
leucine-rich repeat 100..123 CDD:275380 2/22 (9%)
LRR 4 123..144 0/20 (0%)
leucine-rich repeat 124..147 CDD:275380 0/22 (0%)
LRR_8 147..206 CDD:290566 4/58 (7%)
LRR 5 147..168 0/20 (0%)
leucine-rich repeat 148..171 CDD:275380 0/22 (0%)
LRR 6 171..192 0/20 (0%)
leucine-rich repeat 172..195 CDD:275380 0/22 (0%)
LRR_8 195..255 CDD:290566 23/59 (39%)
LRR 7 195..216 10/20 (50%)
leucine-rich repeat 196..219 CDD:275380 9/22 (41%)
LRR 8 219..240 10/20 (50%)
leucine-rich repeat 220..243 CDD:275380 10/22 (45%)
LRR_8 243..300 CDD:290566 17/59 (29%)
LRR 9 244..265 6/20 (30%)
leucine-rich repeat 245..268 CDD:275380 8/23 (35%)
LRR 10 268..289 6/22 (27%)
LRRCT 299..346 CDD:214507 15/38 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 321..358 5/14 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335004
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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