DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek3 and Lrrn2

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:NP_001170839.1 Gene:Lrrn2 / 289020 RGDID:1305482 Length:750 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064
leucine-rich repeat 112..137 CDD:275380
LRR_8 137..196 CDD:290566
leucine-rich repeat 138..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380
LRR_8 184..245 CDD:290566
leucine-rich repeat 186..209 CDD:275380
leucine-rich repeat 210..234 CDD:275380
leucine-rich repeat 235..258 CDD:275380
LRRCT 267..316 CDD:214507
IG_like 328..428 CDD:214653
Ig 335..425 CDD:143165
Lrrn2NP_001170839.1 LRR_RI 46..288 CDD:238064
leucine-rich repeat 51..69 CDD:275380
leucine-rich repeat 71..94 CDD:275380
leucine-rich repeat 95..118 CDD:275380
LRR_8 117..177 CDD:290566
leucine-rich repeat 119..142 CDD:275380
leucine-rich repeat 143..166 CDD:275380
LRR_8 166..222 CDD:290566
leucine-rich repeat 167..190 CDD:275380
leucine-rich repeat 191..214 CDD:275380
LRR_RI 214..>372 CDD:238064
LRR_8 214..273 CDD:290566
leucine-rich repeat 215..238 CDD:275380
leucine-rich repeat 239..262 CDD:275380
leucine-rich repeat 263..286 CDD:275380
leucine-rich repeat 287..311 CDD:275380
LRR_8 310..371 CDD:290566
leucine-rich repeat 312..334 CDD:275380
leucine-rich repeat 337..360 CDD:275378
leucine-rich repeat 361..373 CDD:275378
TPKR_C2 369..412 CDD:301599
I-set 430..514 CDD:254352
Ig 438..514 CDD:299845
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9069
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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