DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek3 and Elfn1

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:NP_001099383.1 Gene:Elfn1 / 288512 RGDID:1308787 Length:829 Species:Rattus norvegicus


Alignment Length:1020 Identity:181/1020 - (17%)
Similarity:288/1020 - (28%) Gaps:426/1020 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 IPQPLDAGTQLLDLSGNEIQLIPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLS 168
            |||.::  ..::||..||.::......:.::..||..:.|.:..:..||..||....||..|.|.
  Rat    54 IPQQIN--NTIVDLRLNENRIRSVQYASLSRFGNLTYLNLTKNEIGYIEDGAFSGQFNLQVLQLG 116

  Fly   169 QNLLSAIPSLALYHVSELRELRLSGNPILRVPDDAFGHVPQLVKLELSDCRLSHIAVRAFAGLES 233
            .|.|..:....|..:|:|..|.|..|.|..|...||...|.:|.::||                 
  Rat   117 YNRLRNLTEGMLRGLSKLEYLYLQANLIEVVMASAFWECPNIVNIDLS----------------- 164

  Fly   234 SLEWLKLDGNRLSEVRSGTITSLASLHGLELARNTWNCSCSLRPLRAWML--------------- 283
                    .||:.::.|||...|..|...|:..|.:.|||.|.....|:.               
  Rat   165 --------MNRIQQLGSGTFAGLTKLSVCEIYSNPFYCSCELLGFLRWLAAFTNATQTHDRVQCE 221

  Fly   284 ------------------QQNIPSGIPPTCE---------SPPR-LSGRAW-------DKLDVDD 313
                              |::|.|.:...|.         .||| :.||:.       ...:..|
  Rat   222 SPPVYAGYFLLGQGRHGHQRSILSKLQSVCTEGSYTAEVLGPPRPVPGRSQPGHSPPPPPPEPSD 286

  Fly   314 FAC-----------VPQIVATDTTAHGVEGRNITMSCYVEGVPQPAVKWLLKN--RLIANLSAGG 365
            ..|           .|.:|.|            |:....|..|...||.|.:|  .::..|    
  Rat   287 MPCADDECFSGDGTTPLVVLT------------TLVPQTEARPSMKVKQLTQNSATIMVQL---- 335

  Fly   366 DGDSDSEPRTAAATQGRKTYVVNMLRNASNLTI--LTADMQD---AGIYT------CAAENKAGK 419
                        .:...:.|.:....|:.:.|:  ||...::   ..:||      |.....:|.
  Rat   336 ------------PSPFNRMYTLEQYNNSKSFTVSKLTQPQEEIRLTNLYTLTNYTYCVVSTSSGT 388

  Fly   420 VEASVTLAVS-RRPPEAPWGVR---------IILLGAVAALLLVGGSSFAAICLCSLQRRRKLRL 474
            ......|.:. .:||..|..|.         :.:||.:..::||.|    |:..| |::||    
  Rat   389 HHNHTCLTICLPKPPSPPGPVPSPSTATHYIMTILGCLFGMVLVLG----AVYYC-LRKRR---- 444

  Fly   475 WNSVPPVRRSESYEK-------------IEMTARTRPDLGGGASCGGGSATGAGLFHDAEEQGYL 526
                   |:.|.::|             ||:......:..|.|....|...|        .:...
  Rat   445 -------RQEEKHKKAVAAAAGSLKKTIIELKYGPEIEAPGLAPLTQGPLLG--------PEAVT 494

  Fly   527 RAAHTPLNDNDAGQAAAIVNPSAGSAQRRNGDYLHVSTHCDDEEEDQQLHHHPQQQPASQHHPHP 591
            |..:.|...:|..|...:  .|..:.:...|:|:.|.|                           
  Rat   495 RIPYLPAATSDVEQYKLV--ESGETPKATKGNYIEVRT--------------------------- 530

  Fly   592 NQQQHQQRKGSQGHVVSASGANNSAPLEETDLHIPRLIDIGGTDSASSSISSQVDAAARLAGYAG 656
                        |......|...|.|..||...:..:          |:|:.:||          
  Rat   531 ------------GEPPERRGCELSRPAPETQSSVAEI----------STIAKEVD---------- 563

  Fly   657 HTWKTTPIATTKINSPHSKPVTSAAPSSLNTQATPYAHYGNHPADEMATSVFCSEGQESDLFDSN 721
                       ::|.     :.:....:|.:::|.:                  :|.:|.     
  Rat   564 -----------RVNQ-----IINNCIDALKSESTSF------------------QGAKSG----- 589

  Fly   722 YPDLLDIAKYAVAQAQQEGRGQGYAQATTTPNGGLCTLPRKLKTSGKYFRNSSDSQSPLLADNSS 786
                      ||:.|:.:                |..|...|.:...:.       ||:..|   
  Rat   590 ----------AVSAAEPQ----------------LVLLSEPLASKHSFL-------SPVYKD--- 618

  Fly   787 KYGSSTLGDGSFLNEAMGLGRRYSAESSYANYSSTATYTGGGQRANSFLNLVQSGAHQGKLLPSH 851
                 ..|.|       ||.|.:|.|:: ......:|.:.|..|:........:|||:.....:.
  Rat   619 -----AFGHG-------GLQRHHSVEAA-TGPPRASTSSSGSARSPRTFRAETAGAHKAPATETK 670

  Fly   852 LGQKPSLPSSPVQHQRSLSSAATPLLDFSALASRAAGAANTSVAAYDYHAAQLERFLEEYRNLQD 916
            ..:|    ||||                                                     
  Rat   671 YIEK----SSPV----------------------------------------------------- 678

  Fly   917 QLCKMKETCDTIRKKETPLRVAIGQSAAQLADPVMYSAASHSPKPPATSNLKTKTLLPGQPPDPP 981
                 .||..|:....|.|| |....:.|..:.......||..:|||             ||.||
  Rat   679 -----PETILTVTPAATVLR-AEADKSRQYGEHRHSYPGSHPAEPPA-------------PPPPP 724

  Fly   982 PYWLHRNAMLKRLNGDGSAGTNGSGGSPAS-------PQPRQDIF 1019
            |  .|                .|.||..||       |:||..::
  Rat   725 P--TH----------------EGLGGRKASILEPLTRPRPRDLVY 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 39/156 (25%)
leucine-rich repeat 112..137 CDD:275380 4/24 (17%)
LRR_8 137..196 CDD:290566 19/58 (33%)
leucine-rich repeat 138..161 CDD:275380 6/22 (27%)
leucine-rich repeat 162..185 CDD:275380 6/22 (27%)
LRR_8 184..245 CDD:290566 14/60 (23%)
leucine-rich repeat 186..209 CDD:275380 8/22 (36%)
leucine-rich repeat 210..234 CDD:275380 3/23 (13%)
leucine-rich repeat 235..258 CDD:275380 6/22 (27%)
LRRCT 267..316 CDD:214507 16/98 (16%)
IG_like 328..428 CDD:214653 18/112 (16%)
Ig 335..425 CDD:143165 17/102 (17%)
Elfn1NP_001099383.1 LRR <44..>186 CDD:227223 41/158 (26%)
leucine-rich repeat 65..85 CDD:275378 3/19 (16%)
LRR_8 85..144 CDD:404697 19/58 (33%)
leucine-rich repeat 86..109 CDD:275378 6/22 (27%)
leucine-rich repeat 110..133 CDD:275378 6/22 (27%)
leucine-rich repeat 134..157 CDD:275378 8/22 (36%)
leucine-rich repeat 158..171 CDD:275378 5/37 (14%)
LRRCT 190..>228 CDD:214507 6/37 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334978
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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