DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek3 and lrrn3a

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:XP_005163128.1 Gene:lrrn3a / 101887059 ZFINID:ZDB-GENE-061220-7 Length:691 Species:Danio rerio


Alignment Length:538 Identity:112/538 - (20%)
Similarity:176/538 - (32%) Gaps:197/538 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LLWLLCCCS--------QLGQLRAECPAVCECK---WKS------GKESVLCLNANLTHIPQPLD 109
            ||:.:|..:        |..:....|..:|:|:   |.|      ...:|.|.:..|..:|:.|.
Zfish     4 LLFAVCLLAGLALTNSVQASKWSVVCLKLCKCEIRPWFSPLSMYNEAPTVDCNDLGLLTLPERLP 68

  Fly   110 AGTQLL-----------------------DLSGNEIQLIPD-----------------------D 128
            :.||:|                       |||.|.|..:.|                       |
Zfish    69 SDTQVLLSQANSIAKIDSPLDYLVNLTEVDLSRNNISSLSDIYIGHIPQLLSLHLEENWLSSLHD 133

  Fly   129 SFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSAI------------------ 175
            :| .|...|||::|:....|.||...||:.|..|:.|.|:.|.|.||                  
Zfish   134 NF-LAHFPNLQELYVNHNLLSLISAEAFQGLNKLLRLHLNSNQLRAIRSEWFQDLSQLEILMIGE 197

  Fly   176 ------------------------------------------------------PSLALYHVSEL 186
                                                                  |..||..|..|
Zfish   198 NPIARIQNMNFKPLINLRSLVLTRMNLTEIPDSALVGLDKLESVSFYDNMFPKVPQAALRQVRNL 262

  Fly   187 RELRLSGNPILRV-------------------PD----DAFG--HVPQLVKLE-LSDCRLSHIAV 225
            :.|.|:.|||.|:                   |:    |:|.  ::|:|.|:| .::.|||:|..
Zfish   263 KFLDLNKNPIERIQRGDFVDMIHLKELGINSMPELVSIDSFALHNLPELTKIEATNNPRLSYIHP 327

  Fly   226 RAFAGLESSLEWLKLDGNRLSEVRSGTITSLASLHGLELARNTWNCSCSLRPLRAWMLQQNIPSG 290
            .||:.| ..||.|.|:.|.|..:...|:.||.:|..:.:..|...|.|.:|    |:...|....
Zfish   328 NAFSQL-PRLESLMLNSNALRALHHITVESLPNLQEVSIHSNPIYCDCVIR----WINMNNTRVR 387

  Fly   291 IPP----TCESPPRLSGRAWDKLDVDDFA--CVPQIVATDTTAHGVE---GRNITMSCYVEGVPQ 346
            ...    .|..|....||...::...:.|  |:| :::.::....|.   |..:::.|.....|:
Zfish   388 FMELDALLCAGPSEFEGRLVKQVHSREMADICLP-LISPESLPDQVNVGTGHLVSLHCRAFADPE 451

  Fly   347 PAVKWLLKNRLIANLSAGGDGDSDSEPRTAAATQGRKTYVVNMLRNASNLTILTADMQDAGIYTC 411
            |.:.|:                :.|..:.......:|.:    |.......|......:||.|||
Zfish   452 PEIYWV----------------TPSGEKILPQMDSKKYH----LHPEGTFDIYGITENEAGQYTC 496

  Fly   412 AAENKAGKVEASVTLAVS 429
            .|.|..|....||.:.|:
Zfish   497 VAHNLIGVDMRSVLVIVN 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 64/300 (21%)
leucine-rich repeat 112..137 CDD:275380 12/70 (17%)
LRR_8 137..196 CDD:290566 25/130 (19%)
leucine-rich repeat 138..161 CDD:275380 9/22 (41%)
leucine-rich repeat 162..185 CDD:275380 11/94 (12%)
LRR_8 184..245 CDD:290566 26/86 (30%)
leucine-rich repeat 186..209 CDD:275380 10/47 (21%)
leucine-rich repeat 210..234 CDD:275380 10/24 (42%)
leucine-rich repeat 235..258 CDD:275380 9/22 (41%)
LRRCT 267..316 CDD:214507 11/54 (20%)
IG_like 328..428 CDD:214653 20/102 (20%)
Ig 335..425 CDD:143165 17/89 (19%)
lrrn3aXP_005163128.1 LRR_RI 29..>272 CDD:238064 47/243 (19%)
leucine-rich repeat 52..70 CDD:275380 5/17 (29%)
leucine-rich repeat 71..93 CDD:275380 3/21 (14%)
leucine-rich repeat 94..117 CDD:275380 6/22 (27%)
leucine-rich repeat 118..141 CDD:275380 3/23 (13%)
LRR_8 140..200 CDD:290566 17/59 (29%)
leucine-rich repeat 142..165 CDD:275380 9/22 (41%)
leucine-rich repeat 166..189 CDD:275380 7/22 (32%)
leucine-rich repeat 190..213 CDD:275380 0/22 (0%)
LRR_8 213..272 CDD:290566 8/58 (14%)
leucine-rich repeat 214..237 CDD:275380 0/22 (0%)
leucine-rich repeat 238..261 CDD:275380 4/22 (18%)
leucine-rich repeat 262..285 CDD:275380 7/22 (32%)
leucine-rich repeat 286..310 CDD:275380 3/23 (13%)
LRR_8 309..370 CDD:290566 22/61 (36%)
leucine-rich repeat 311..333 CDD:275380 9/21 (43%)
leucine-rich repeat 336..359 CDD:275378 9/22 (41%)
leucine-rich repeat 360..372 CDD:275378 2/11 (18%)
LRRCT 368..412 CDD:214507 10/47 (21%)
IG_like 429..513 CDD:214653 20/103 (19%)
Ig 437..513 CDD:299845 19/95 (20%)
FN3 526..>591 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6470
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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