DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek3 and lrrc4

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:XP_002939414.1 Gene:lrrc4 / 100493671 XenbaseID:XB-GENE-968937 Length:641 Species:Xenopus tropicalis


Alignment Length:446 Identity:126/446 - (28%)
Similarity:190/446 - (42%) Gaps:103/446 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LHLHLLLWLLCCCSQLGQLRAECPAVCECKWKSGKESVLCLNANLTHIPQPLDAGTQLLDLSGNE 121
            ::|.:.:|:.|......|   .||:||.|..:..|  |:|....|:.:||.:.:.|:.|:|..|.
 Frog    21 IYLMVHMWISCAAYSGPQ---SCPSVCSCSNQFSK--VVCTRRGLSEVPQGIPSNTRSLNLMENN 80

  Fly   122 IQLIPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSAIPSLALYHVSEL 186
            ||:|..|:|  ..|.:|:.:.|.|..:|.||..||..|.:|..|:|..|.|:.|||.|..::|:|
 Frog    81 IQMIQADTF--RHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKL 143

  Fly   187 RELRLSGNPILRVPDDAFGHVPQLVKLELSDC-RLSHIAVRAFAGLES----------------- 233
            |||.|..|||..:|..||..||.|::|:|.:. :|.:|:..||.||.:                 
 Frog   144 RELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLYNLKYLNLGMCNIRDMPNL 208

  Fly   234 ----SLEWLKLDGNRLSEVRSGT---------------------------ITSLASLH------- 260
                .||.|::.||...|::.|:                           :|||..|:       
 Frog   209 TPLVGLEELEISGNNFPEIKPGSFHGLRSLKKLWIMNSQINTIERNAFDDLTSLVELNLAHNNVT 273

  Fly   261 --------------GLELARNTWNCSCSLRPLRAWMLQQNIP--SGIPPTCESPPRLSGRAWDKL 309
                          .|.|..|.|:|.|.:..| :|.|::.||  |.....|.|||.:.|:...::
 Frog   274 SLPHDLFAPLKYLVELHLHHNPWDCDCDVLWL-SWWLREYIPTNSTCCGRCHSPPHMRGKYVVEV 337

  Fly   310 DVDDFAC-VPQIVATDTTAHGVEGRNITMSCYVEGVPQPAVKWLLKNRLIANLSAGGDGDSDSEP 373
            |...|.| .|.|:......:..|||...:.|....:  .:|:|||.|..:..       .:.:.|
 Frog   338 DHSMFQCSAPFIMDAPRDLNISEGRMAELKCRTSAM--SSVRWLLPNGTVLT-------HASNHP 393

  Fly   374 RTAAATQGRKTYVVNMLRNASNLTILTADMQDAGIYTCAAENKAGKVEASVTLAVS 429
            |......|...:         :..:||    |.|:|||...|.||...||..|.||
 Frog   394 RITILNDGTLNF---------SQVLLT----DTGVYTCMVTNVAGNSNASAYLNVS 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 64/226 (28%)
leucine-rich repeat 112..137 CDD:275380 10/24 (42%)
LRR_8 137..196 CDD:290566 25/58 (43%)
leucine-rich repeat 138..161 CDD:275380 9/22 (41%)
leucine-rich repeat 162..185 CDD:275380 9/22 (41%)
LRR_8 184..245 CDD:290566 28/82 (34%)
leucine-rich repeat 186..209 CDD:275380 12/22 (55%)
leucine-rich repeat 210..234 CDD:275380 9/45 (20%)
leucine-rich repeat 235..258 CDD:275380 10/49 (20%)
LRRCT 267..316 CDD:214507 17/50 (34%)
IG_like 328..428 CDD:214653 25/99 (25%)
Ig 335..425 CDD:143165 21/89 (24%)
lrrc4XP_002939414.1 LRRNT 40..71 CDD:214470 11/32 (34%)
LRR <68..285 CDD:227223 62/218 (28%)
leucine-rich repeat 71..94 CDD:275380 10/24 (42%)
leucine-rich repeat 95..118 CDD:275380 9/22 (41%)
leucine-rich repeat 119..142 CDD:275380 9/22 (41%)
leucine-rich repeat 143..166 CDD:275380 12/22 (55%)
leucine-rich repeat 167..191 CDD:275380 9/23 (39%)
leucine-rich repeat 192..213 CDD:275380 0/20 (0%)
leucine-rich repeat 214..237 CDD:275380 7/22 (32%)
leucine-rich repeat 238..261 CDD:275380 0/22 (0%)
leucine-rich repeat 262..283 CDD:275380 2/20 (10%)
LRRCT 294..345 CDD:214507 17/51 (33%)
IG_like 353..435 CDD:214653 25/103 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm49155
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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