DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek3 and lrrtm4

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:XP_031755133.1 Gene:lrrtm4 / 100485215 XenbaseID:XB-GENE-949702 Length:622 Species:Xenopus tropicalis


Alignment Length:350 Identity:90/350 - (25%)
Similarity:131/350 - (37%) Gaps:93/350 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LLLWLLCCCSQLGQLRAECPAVCECKWKSGKESVLCLNANLTHIPQPLDAGTQLLDLSGNEIQLI 125
            |||..|.....:|..:. ||..|.|..|    .|.|.:.....|||.:..|:|.|.|..|.|:::
 Frog    17 LLLPALIVVMVVGAQKT-CPKNCRCDGK----IVYCESHAFRDIPQNISGGSQGLSLRYNSIKML 76

  Fly   126 PDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSAIPSLALYHVSELRELR 190
            ....|  :.|..|..:||...::..::..||:.:..|.||.||.|.:|.:.:...:.|..||.|.
 Frog    77 KSHQF--SGLNQLVWLYLDHNYISTVDEDAFQGIRRLKELILSSNKISYLGNSTFHPVPNLRNLD 139

  Fly   191 LSGNPILRVPDDAFGHVPQLVKLEL-------------SDC-----------RLSHIAVRAFAGL 231
            ||.|.:..:..:.|..:.:|:.|.|             .||           ||..::..|||||
 Frog   140 LSYNKLQTLQSEQFKGLRKLLILHLRSNSLKTVPVRVFQDCRNLDFLDLGYNRLRSLSRNAFAGL 204

  Fly   232 ESSLEWLKLDGNRLSEVRSGTITSLASLHGLELARN---------TWNCSCSLRPLRAWMLQQNI 287
             ..|:.|.|:.|:.|:|.......|.:|..|.|..|         ||          .|...||:
 Frog   205 -LKLKELHLEHNQFSKVNFAHFPRLFNLRSLYLQWNKIRSISQGLTW----------TWSALQNL 258

  Fly   288 PSGIPPTCESPPRLSGRAWDKLDVDDFACVPQI------------VATDTTAHGVEGRNITMS-- 338
            .            |||.....|:...|.|:|.:            |..:|....:...:||:|  
 Frog   259 D------------LSGNDIQNLEPGTFQCLPNLQKLNLDSNKLTNVTQETLNAWISLTSITLSGN 311

  Fly   339 --------CYVEGVPQPAVKWLLKN 355
                    |       |.|.| |||
 Frog   312 IWECTKKIC-------PLVFW-LKN 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 50/180 (28%)
leucine-rich repeat 112..137 CDD:275380 7/24 (29%)
LRR_8 137..196 CDD:290566 19/58 (33%)
leucine-rich repeat 138..161 CDD:275380 5/22 (23%)
leucine-rich repeat 162..185 CDD:275380 8/22 (36%)
LRR_8 184..245 CDD:290566 23/84 (27%)
leucine-rich repeat 186..209 CDD:275380 7/22 (32%)
leucine-rich repeat 210..234 CDD:275380 12/47 (26%)
leucine-rich repeat 235..258 CDD:275380 7/22 (32%)
LRRCT 267..316 CDD:214507 11/57 (19%)
IG_like 328..428 CDD:214653 9/37 (24%)
Ig 335..425 CDD:143165 9/30 (30%)
lrrtm4XP_031755133.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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