DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek3 and lrit3b

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:XP_009305418.1 Gene:lrit3b / 100144406 ZFINID:ZDB-GENE-070424-130 Length:487 Species:Danio rerio


Alignment Length:420 Identity:115/420 - (27%)
Similarity:171/420 - (40%) Gaps:88/420 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LHPP---LRPRLPLHLHLLLWLLCCCSQLGQLRAECPAVCECKWK-----SGKESVLCLNANLTH 103
            ||.|   :||.|...|.|.|.|:.|...     ..||::|.|..:     .|..:|||.|..||.
Zfish    22 LHVPRRTMRPLLYADLSLCLALVVCAQS-----PACPSLCTCVLQGRSDTKGLRTVLCKNPALTA 81

  Fly   104 IPQPLDAGTQLLDLSGNEIQLIPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLS 168
            ||         :||        |:|:.         |..|.|..:..|.|.||..:..|:.|.|:
Zfish    82 IP---------IDL--------PNDTV---------KFRLERTSVSRIFRGAFSAMPELLYLWLT 120

  Fly   169 QNLLSAIPSLALYHVSELRELRLSGNPILRVPDDAFGHVPQLVKLELSDCRLSHIAVRAFAGLES 233
            .|.:|.:...:..::|.|.||||.||.:...|.:....:|:|..|.|.:.||:.|.:.|...|. 
Zfish   121 YNSISVLHPRSFTNLSSLHELRLDGNLLSTFPWEGLRDMPRLRTLGLHNNRLARIPLLAVRYLR- 184

  Fly   234 SLEWLKLDGNRLSEVRSGTITSLASLHG---------LELARNTWNCSCSLRPLRAWMLQQNIPS 289
            ::.:|.|..||||.: :..:|:|.....         |.|..|.|.|.|.|..|      .:|..
Zfish   185 NVTYLDLSSNRLSTL-ANDLTALWLFSDSNQTQRSFVLGLQDNPWVCDCRLSTL------LDISR 242

  Fly   290 GIPP----------TCESPPRLSGRAWDKLDVDDFAC-VPQIVATDTTAHGVEGRNITMSCYVEG 343
            | |.          ||..|..|:|..:..:::.  .| .|.:|.:.|....:.|..:.:.|...|
Zfish   243 G-PESSLVLLDRFLTCSEPLDLAGVPFQSVELS--RCRRPYVVTSATKITALLGSTVLLRCEATG 304

  Fly   344 VPQPAVKWLLKNRLIANLSAGG-------DGDSDSEPRTAAATQGRKTYVVNMLRNASNLTILTA 401
            .|.||:.|:...:  .||...|       ..|::..|:....      ||....|.....::::.
Zfish   305 HPTPALMWIKSAK--RNLYNQGCCKQTQSSLDTERFPKKLFG------YVQESPRVGVRWSVVSL 361

  Fly   402 D---MQDAGIYTCAAENKAGKVEASVTLAV 428
            :   ..|||.|.|.|:|.||..||.|:|.|
Zfish   362 NGISYSDAGEYRCRAQNMAGISEAVVSLNV 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064 44/165 (27%)
leucine-rich repeat 112..137 CDD:275380 4/24 (17%)
LRR_8 137..196 CDD:290566 20/58 (34%)
leucine-rich repeat 138..161 CDD:275380 7/22 (32%)
leucine-rich repeat 162..185 CDD:275380 5/22 (23%)
LRR_8 184..245 CDD:290566 21/60 (35%)
leucine-rich repeat 186..209 CDD:275380 8/22 (36%)
leucine-rich repeat 210..234 CDD:275380 8/23 (35%)
leucine-rich repeat 235..258 CDD:275380 8/22 (36%)
LRRCT 267..316 CDD:214507 14/58 (24%)
IG_like 328..428 CDD:214653 28/109 (26%)
Ig 335..425 CDD:143165 25/99 (25%)
lrit3bXP_009305418.1 LRRNT 51..92 CDD:214470 17/66 (26%)
leucine-rich repeat 69..89 CDD:275380 11/36 (31%)
LRR_8 112..172 CDD:290566 18/59 (31%)
leucine-rich repeat 114..137 CDD:275378 5/22 (23%)
leucine-rich repeat 138..161 CDD:275378 8/22 (36%)
LRR_8 160..214 CDD:290566 17/55 (31%)
LRR_4 160..201 CDD:289563 15/42 (36%)
leucine-rich repeat 162..185 CDD:275378 8/23 (35%)
leucine-rich repeat 186..199 CDD:275378 6/12 (50%)
leucine-rich repeat 215..230 CDD:275378 4/14 (29%)
Ig 278..391 CDD:299845 31/120 (26%)
I-set 279..391 CDD:254352 31/119 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574222
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D246406at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

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