DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek3 and lrfn5a

DIOPT Version :9

Sequence 1:NP_001162986.1 Gene:kek3 / 34912 FlyBaseID:FBgn0028370 Length:1021 Species:Drosophila melanogaster
Sequence 2:XP_001921674.1 Gene:lrfn5a / 100144400 ZFINID:ZDB-GENE-080327-17 Length:786 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek3NP_001162986.1 LRR_RI <110..267 CDD:238064
leucine-rich repeat 112..137 CDD:275380
LRR_8 137..196 CDD:290566
leucine-rich repeat 138..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380
LRR_8 184..245 CDD:290566
leucine-rich repeat 186..209 CDD:275380
leucine-rich repeat 210..234 CDD:275380
leucine-rich repeat 235..258 CDD:275380
LRRCT 267..316 CDD:214507
IG_like 328..428 CDD:214653
Ig 335..425 CDD:143165
lrfn5aXP_001921674.1 leucine-rich repeat 53..76 CDD:275380
LRR_8 75..135 CDD:290566
leucine-rich repeat 77..100 CDD:275380
LRR_4 99..138 CDD:289563
leucine-rich repeat 101..124 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..172 CDD:275380
LRR_8 155..207 CDD:290566
LRR_4 171..212 CDD:289563
leucine-rich repeat 173..196 CDD:275380
leucine-rich repeat 197..215 CDD:275380
TPKR_C2 240..>272 CDD:301599
I-set 287..374 CDD:254352
Ig_2 301..374 CDD:143241
fn3 421..494 CDD:278470
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6336
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.