DRSC/TRiP Functional Genomics Resources

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Protein Alignment lace and sptlc2b

DIOPT Version :9

Sequence 1:NP_001285957.1 Gene:lace / 34910 FlyBaseID:FBgn0002524 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001108213.1 Gene:sptlc2b / 557286 ZFINID:ZDB-GENE-080305-8 Length:558 Species:Danio rerio


Alignment Length:535 Identity:291/535 - (54%)
Similarity:383/535 - (71%) Gaps:30/535 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 EKKSIPNGHAS---ILDQESKPNQAE------------GKLSPELEHFQKTSFEEVPLHTACLTY 127
            :||:..||...   :..|:.....||            .||..|       ||||.||..|.|||
Zfish    17 DKKTCGNGFVKSHCLFQQKRYRRPAEKNHHASCTSLLYNKLFVE-------SFEETPLLVAVLTY 74

  Fly   128 LGFYLLMILGYINQLLFVPK-----VATEK-GRDGYVALYDAFESFYSRYVYRRIKDCWNRPICS 186
            :|:.:|.|.||:...|...|     :|.|: .:..:|.||..||:||:|.:|.||:|.|||||||
Zfish    75 MGYGILTIFGYLRDFLRDWKFEKCHLAREREEQKDFVPLYQDFENFYTRNLYMRIRDNWNRPICS 139

  Fly   187 VPGDELTLKDRVTDDYGWSFKFTGTETR-CLNLGSYNYLGFAAATGQCADDSEESARSSGLAYCS 250
            |||.::.|.:|||.||.|:|:.||...: .:|:|||||||||..:|.|||.:..|....|:...|
Zfish   140 VPGAKMDLVERVTPDYNWTFEHTGKVLKDVINMGSYNYLGFAENSGTCADAAAHSTVKYGVGVSS 204

  Fly   251 SRCELGDNEQLQELEALTARYFGVEDAIVFGMGFATNALNLPSLLGPNSLVISDEKNHASIILGL 315
            :|.|:|:.::.:|||.|.||:.|||.::|||||||||::|:|:|.|...|::|||.||||::||.
Zfish   205 TRQEIGNLDKHEELEKLVARFLGVESSMVFGMGFATNSMNIPALTGKGCLILSDELNHASLVLGA 269

  Fly   316 RLSGATTKVFKHNNMRDLERVLRQGVCYGNPKKGGQPWDKVMILVEGIFSMEGSIVRLPEVIALK 380
            ||||:|.:|||||||:.||::||..:.:|.|:. .:||.|::|:||||:||||||||||||||||
Zfish   270 RLSGSTIRVFKHNNMQSLEKMLRDAIVHGQPRT-HRPWKKILIVVEGIYSMEGSIVRLPEVIALK 333

  Fly   381 KKYKAYLYLDEAHSVGAMGSRGRGVTDYFNVDPKEVDILMGTFTKSFGSAGGYLAGSKKLIDFLR 445
            ||||||||||||||:||:|:|||||.|||.:||.:|||:|||||||||:||||:.|.|:|||:||
Zfish   334 KKYKAYLYLDEAHSIGALGTRGRGVVDYFGLDPSDVDIMMGTFTKSFGAAGGYIGGKKELIDYLR 398

  Fly   446 TNSHAHCYAASISPPIAQQILTSMKTIMGEDGTDIGRKKIHQLARNTRYFRRRLAQLGVITYGHE 510
            .:||:..||.|:||||.|||:||||.|||:|||.:|::::.||:.||.||||||.::|.|.||:.
Zfish   399 LHSHSAVYATSMSPPITQQIITSMKCIMGKDGTTLGQERLRQLSENTTYFRRRLHEMGFIIYGNN 463

  Fly   511 DSPVVPMLVYLFSKIGAVVRTLTTRHIAAVGAGFPATPIMEGRIRFCLSAAHTKEQLDFALEAID 575
            ||||||:::|:.:||||..|.:..|:|..|..|||||||:|.|.|||:|||||:|.||.||.||.
Zfish   464 DSPVVPLMLYMPAKIGAFGREMLKRNIGTVVVGFPATPIIESRARFCVSAAHTREMLDTALNAIS 528

  Fly   576 EIADDLGLKYSRKPR 590
            |:.|.|.||||||.|
Zfish   529 EVGDLLQLKYSRKYR 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
laceNP_001285957.1 PLN02483 117..587 CDD:178101 274/476 (58%)
BioF 164..577 CDD:223234 249/413 (60%)
sptlc2bNP_001108213.1 PLN02483 66..540 CDD:178101 273/474 (58%)
BioF 116..531 CDD:223234 250/415 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 463 1.000 Domainoid score I453
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 569 1.000 Inparanoid score I1031
OMA 1 1.010 - - QHG53569
OrthoDB 1 1.010 - - D312139at33208
OrthoFinder 1 1.000 - - FOG0001517
OrthoInspector 1 1.000 - - otm25687
orthoMCL 1 0.900 - - OOG6_100700
Panther 1 1.100 - - O PTHR13693
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R652
SonicParanoid 1 1.000 - - X956
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.870

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