DRSC/TRiP Functional Genomics Resources

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Protein Alignment lace and Sptlc3

DIOPT Version :10

Sequence 1:NP_476614.1 Gene:lace / 34910 FlyBaseID:FBgn0002524 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001099987.1 Gene:Sptlc3 / 296188 RGDID:1310030 Length:563 Species:Rattus norvegicus


Alignment Length:545 Identity:233/545 - (42%)
Similarity:355/545 - (65%) Gaps:27/545 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 HPEKKSIPNGHASILDQESKPNQAEGK------LSPELEHFQKTS---------FEEVPLHTACL 125
            :|...::.||  ::.:.:::|.:.:..      :|.|.:..:|..         :.|.||:....
  Rat     3 NPRDSAVTNG--TLRNPKTQPGKRQSTDCVKNGISKEAQQNRKAEEDDKLVFKPYPEPPLYVFVF 65

  Fly   126 TYLGFYLLMILGYINQLL---FVPK----VATEKGRDGYVALYDAFESFYSRYVYRRIKDCWNRP 183
            ||:|:.:.|:.||:...:   .:.|    |..|:.:| :|.||..||:||:|.:|.||:|.|:..
  Rat    66 TYMGYGIGMLFGYLRDFMRNWGIEKCNAAVEREEQKD-FVPLYQDFENFYTRNLYMRIRDSWSHT 129

  Fly   184 ICSVPGDELTLKDRVTDDYGWSFKFTGTETR-CLNLGSYNYLGFAAATGQCADDSEESARSSGLA 247
            :||||.....:.::|||||.|:|:.||...: .:|:.||||||.|:...:..:..:::....|:.
  Rat   130 VCSVPVPNFDIMEKVTDDYNWTFRHTGKVIKNVINMASYNYLGLASKYNESMEKVKDTIEKYGVG 194

  Fly   248 YCSSRCELGDNEQLQELEALTARYFGVEDAIVFGMGFATNALNLPSLLGPNSLVISDEKNHASII 312
            ..|:|.|:|..:...|||.|.|::..||..:|||||||||:.|:|..:|...|::|||.||.|:|
  Rat   195 VASTRNEMGSLDIHNELEDLMAKFLNVEAVMVFGMGFATNSTNIPIFVGKGCLILSDEFNHTSVI 259

  Fly   313 LGLRLSGATTKVFKHNNMRDLERVLRQGVCYGNPKKGGQPWDKVMILVEGIFSMEGSIVRLPEVI 377
            ||.|||||..:.|||||:::||::||:.:..|.|:. |:.|.|::|||||::|||||||.||:::
  Rat   260 LGSRLSGAVIRPFKHNNIQNLEKLLREAIIRGQPRT-GRAWKKILILVEGVYSMEGSIVNLPQIV 323

  Fly   378 ALKKKYKAYLYLDEAHSVGAMGSRGRGVTDYFNVDPKEVDILMGTFTKSFGSAGGYLAGSKKLID 442
            |||||||||||:|||||:|..|:.|:|:.:.|.:.|:::||.||||||||.::|||:||.|:::|
  Rat   324 ALKKKYKAYLYMDEAHSIGCTGTMGQGIRELFGLAPEDIDIYMGTFTKSFAASGGYIAGKKEIVD 388

  Fly   443 FLRTNSHAHCYAASISPPIAQQILTSMKTIMGEDGTDIGRKKIHQLARNTRYFRRRLAQLGVITY 507
            ::|..||:..||.|:||.:|.||:.|:|.:||.:|...|.::|.||..|.:||||||.::|.|.|
  Rat   389 YVRVQSHSATYATSMSPVVAAQIIRSLKIMMGYEGNFGGVQRIQQLRENIKYFRRRLIEMGFIIY 453

  Fly   508 GHEDSPVVPMLVYLFSKIGAVVRTLTTRHIAAVGAGFPATPIMEGRIRFCLSAAHTKEQLDFALE 572
            |::.|||||:|:|:.:|:.|..|.|..:.||.|..|||||.:.|||.||.||:|||:|.||..||
  Rat   454 GNDYSPVVPVLLYMPAKVSAFGRLLLKKKIAVVVVGFPATSLPEGRARFSLSSAHTREMLDTVLE 518

  Fly   573 AIDEIADDLGLKYSRKPRDPNPVIY 597
            .:|:|.|.|.:||....:....|:|
  Rat   519 VVDKIGDLLNVKYFPYKKSGRAVLY 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
laceNP_476614.1 AAT_I 117..587 CDD:450240 224/477 (47%)
Sptlc3NP_001099987.1 AAT_I 59..533 CDD:450240 223/475 (47%)

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