DRSC/TRiP Functional Genomics Resources

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Protein Alignment lace and sptl-1

DIOPT Version :9

Sequence 1:NP_001285957.1 Gene:lace / 34910 FlyBaseID:FBgn0002524 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001379707.1 Gene:sptl-1 / 173389 WormBaseID:WBGene00016020 Length:458 Species:Caenorhabditis elegans


Alignment Length:504 Identity:120/504 - (23%)
Similarity:220/504 - (43%) Gaps:83/504 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 PELEHFQKTSFEEVPLHTACLTYLGFYLLMILGYI-------NQLLFVPKVATEKGRDGYVALYD 162
            |:..||                |:...|:.:|.|:       .|...:.|..||:.:|..:|   
 Worm     5 PDSWHF----------------YIETLLVALLAYVVMRNRSKRQQEKLSKKLTERQKDELIA--- 50

  Fly   163 AFESFYSRYVYRRIKDCWNRPIC-SVPGDELTLKDRVTDDYGWSFKFTGTE-TRCLNLGSYNYLG 225
                           |....|:. ..|.|...|..:..|  |...|....: .:.||:.|.|:|.
 Worm    51 ---------------DWTPEPLVPETPQDHPVLNPKYAD--GKMTKDVSIDGEKYLNMASTNFLS 98

  Fly   226 FAAATGQCADDSEESARSSGLAYCSSRCELGDNEQLQELEALTARYFGVEDAIVFGMGFATNALN 290
            |.... :..|.::::....|:..|..|...|..:...:||...|::.|.|:|:::..||||.:..
 Worm    99 FIGVK-RIEDRAKQTIFKYGVGSCGPRGFYGTVDVHLDLEKELAKFMGCEEAVLYSYGFATVSSA 162

  Fly   291 LPSLLGPNSLVISDEKNHASIILGLRLSGATTKVFKHNNMRDLERVL--RQGVCYGNPKKGGQPW 353
            :|:......::..||..:.:|..||:.|.:..:.||||:|..|||:|  ::.....:|||.... 
 Worm   163 IPAYAKKGDVIFVDEGVNFAIQKGLQASRSRVEYFKHNDMEHLERLLLEQEQRDKKDPKKAKSV- 226

  Fly   354 DKVMILVEGIFSMEGSIVRLPEVIALKKKYKAYLYLDEAHSVGAMGSRGRGVTDYFNVDPKEVDI 418
             :..|:|||::.....:..||::|..|.::|..:::||:.|.|.:|..|||||::|||..::||:
 Worm   227 -RRFIVVEGLYVNYADLCPLPKIIEFKWRFKVRVFIDESWSFGVIGKTGRGVTEHFNVPMEDVDM 290

  Fly   419 LMGTFTKSFGSAGGYLAGSKKLIDFLRTNSHAHCYAASISPPIAQQILTSMKTIMGEDGTDI--- 480
            :|.:...:..|.||:..|...::...|.:...:|::||: ||:.....:...:|:.|:.:.:   
 Worm   291 VMASLENALASTGGFCVGRSYVVGHQRLSGLGYCFSASL-PPLLATAASEAISIIDEEPSRVQKV 354

  Fly   481 ------GRKKIHQLARNTRYFRRRLAQ--LGVITYGHEDSPVVPMLVYLFSKIGAVVRTLTTR-H 536
                  |:||:......:::..:...:  :..|.|..||..         .::...|.|:.|: |
 Worm   355 TEMAINGQKKLQDALSGSKFSLQGCPESPMKHIYYNGEDEE---------KQLDTFVETVFTKNH 410

  Fly   537 IAAVGAG-------FPATPIMEGRIRFCLSAAHTKEQLDFALEAIDEIA 578
            :....|.       |...|    .||.......|:|::..|::||..:|
 Worm   411 LLLTRARYLDKDELFKIRP----SIRVMFQHDLTEEEIQRAVDAIRVVA 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
laceNP_001285957.1 PLN02483 117..587 CDD:178101 117/492 (24%)
BioF 164..577 CDD:223234 106/435 (24%)
sptl-1NP_001379707.1 AAT_I 9..455 CDD:418510 118/498 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312139at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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