DRSC/TRiP Functional Genomics Resources

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Protein Alignment lace and Alas1

DIOPT Version :9

Sequence 1:NP_001285957.1 Gene:lace / 34910 FlyBaseID:FBgn0002524 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001278764.1 Gene:Alas1 / 11655 MGIID:87989 Length:642 Species:Mus musculus


Alignment Length:593 Identity:153/593 - (25%)
Similarity:248/593 - (41%) Gaps:92/593 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SYATTNGNG-KVPNGNGAADLSAPEKQELLRKFSAPAYTEIRTRRCQPKPANDAQSPSSINYHPE 78
            |.||:.|:| |.|  ..||.|| .....:.||.|.....:::......|.|  ||||        
Mouse    99 SPATSQGSGSKCP--FLAAQLS-QTGSSVFRKASLELQEDVQEMHAVRKEA--AQSP-------- 150

  Fly    79 KKSIPNGHASILDQESKPNQAEGKLSPELEHFQKTSFEEVPLHTACLTYLGFYLLMILGYINQLL 143
               :|....::......|::.       |::||....::.|...:.|  |...|...:.......
Mouse   151 ---VPPSLVNVKTDGEDPSRL-------LKNFQDIMRKQRPERVSHL--LQDNLPKSVSTFQYDH 203

  Fly   144 FVPKVATEKGRDGYVALYDAFESFYSRYVYRRIKDCWNR----PICSVPGDELTLKDRVTDDYGW 204
            |..|...||..|               :.||..|....|    |:.....|.|..|.:|:   .|
Mouse   204 FFEKKIDEKKND---------------HTYRVFKTVNRRAQIFPMADDYTDSLITKKQVS---VW 250

  Fly   205 SFKFTGTETRCLNLGSYNYLGFAAATGQCADDSEESARSSGLAYCSSRCELGDNEQLQELEALTA 269
                      |.|    :|||.:.....|. ...|:.:..|.....:|...|.::...|||...|
Mouse   251 ----------CSN----DYLGMSRHPRVCG-AVMETVKQHGAGAGGTRNISGTSKFHVELEQALA 300

  Fly   270 RYFGVEDAIVFGMGFATNALNLPSL--LGPNSLVISDEKNHASIILGLRLSGATTKVFKHNNMRD 332
            ...|.:.|::|...|..|...|.:|  :.|...:.||..||||:|.|:|.|.....:|:||::..
Mouse   301 DLHGKDAALLFSSCFVANDSTLFTLAKMMPGCEIYSDSGNHASMIQGIRNSRVPKYIFRHNDVNH 365

  Fly   333 LERVLRQGVCYGNPKKGGQPWDKVMILVEGIFSMEGSIVRLPEVIALKKKYKAYLYLDEAHSVGA 397
            |..:|::          ..|....::..|.:.||:|::..|.|:..:..::.|..::||.|:||.
Mouse   366 LRELLQR----------SDPSVPKIVAFETVHSMDGAVCPLEELCDVAHEFGAITFVDEVHAVGL 420

  Fly   398 MGSRGRGVTDYFNVDPKEVDILMGTFTKSFGSAGGYLAGSKKLIDFLRTNSHAHCYAASISPPIA 462
            .|:||.|:.|...|.|| :||:.||..|:||..|||:|.:..|||.:|:.:....:..|:.|.:.
Mouse   421 YGARGGGIGDRDGVMPK-MDIISGTLGKAFGCVGGYIASTSLLIDTVRSYAAGFIFTTSLPPMLL 484

  Fly   463 QQILTSMKTIMGEDGTDIGRKKIHQLARNTRYFRRRLAQLGVITYGHEDSPVVPMLVYLFSKIGA 527
            ...|.|::.:...:|..:.|:  ||  ||.:..|:.|...|:... |..|.::|:.|...:|...
Mouse   485 AGALESVRILKSSEGRALRRQ--HQ--RNVKLLRQMLMDAGLPVI-HCPSHIIPVRVADAAKNTE 544

  Fly   528 VVRTLTTRHIAAVGA-GFPATPIMEGRIRFCLSAAHTKEQLDFALEAIDEIADDLGLK------- 584
            :...|.|||...|.| .:|..|..|..:|...:..||.:.::|.:|.:......:||:       
Mouse   545 ICDELMTRHNIYVQAINYPTVPRGEELLRIAPTPHHTPQMMNFFVEKLLVTWKRVGLELKPHSSA 609

  Fly   585 ---YSRKP 589
               :.|:|
Mouse   610 ECNFCRRP 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
laceNP_001285957.1 PLN02483 117..587 CDD:178101 126/486 (26%)
BioF 164..577 CDD:223234 115/419 (27%)
Alas1NP_001278764.1 Preseq_ALAS 2..140 CDD:286162 14/43 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..109 5/9 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..163 7/31 (23%)
AAT_I 199..604 CDD:302748 122/453 (27%)
BioF 199..600 CDD:223234 120/449 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0156
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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