DRSC/TRiP Functional Genomics Resources

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Protein Alignment sna and CRZ1

DIOPT Version :10

Sequence 1:NP_476732.1 Gene:sna / 34908 FlyBaseID:FBgn0003448 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_014371.1 Gene:CRZ1 / 855704 SGDID:S000004972 Length:678 Species:Saccharomyces cerevisiae


Alignment Length:506 Identity:99/506 - (19%)
Similarity:156/506 - (30%) Gaps:187/506 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DSQFAQDQ---------PQDL-------SLKRGRDE---------ETQDYQQPEPKRDY--VLNL 70
            ||.::..:         ||||       .|....|:         ...:|..|.....|  :.||
Yeast   190 DSNYSDTESNYHTPYLYPQDLVSSPAMSHLTANNDDFDDLLSVASMNSNYLLPVNSHGYKHISNL 254

  Fly    71 SKTPERNSSSSSNSCLLSPPVEAQDYLPTEIHMRGL--TAGTTGYTTATPTTINPFQSAFVMAAG 133
            .:..:..|.:.|::.|||    |.:.........|:  ||.|...|.|    ||..:      .|
Yeast   255 DELDDLLSLTYSDNNLLS----ASNNSDFNNSNNGIINTADTQNSTIA----INKSK------VG 305

  Fly   134 CN-------PISALWSSYQPHLAAFPSPASSMASPQSVYSYQQMTPPSSPGSDLETGS------- 184
            .|       |.|:.           |||::..|....:.|.|:......|..:.:.|:       
Yeast   306 TNQKMLLTIPTSST-----------PSPSTHAAPVTPIISIQEFNEGHFPVKNEDDGTLQLKVRD 359

  Fly   185 -------------EPEDLSVRNDIPLPALFHLFDE------AKSSSSGASVSSSSGYSYTPAMSA 230
                         .|:|....|: .|..:...|::      .|...|....|.:|..|:|...|:
Yeast   360 NESYSATNNNNLLRPDDNDYNNE-ALSDIDRSFEDIINGRKLKLKKSRRRSSQTSNNSFTSRRSS 423

  Fly   231 SS---------ASVAANHAK--------------------------------------------- 241
            .|         .|::||..|                                             
Yeast   424 RSRSISPDEKAKSISANREKLLEMADLLPSSENDNNRERYDNDSKTSYNTINSSNFNEDNNNNNL 488

  Fly   242 ------------NYRFKCDECQKMYSTSMGLSKHRQFHCPAAECNQE------------KKTHSC 282
                        |.:.:.|:..|.....:.:....||.......|.:            ||..:.
Yeast   489 LTSKPKIESGIVNIKNELDDTSKDLGILLDIDSLGQFEQKVGFKNDDNHENNDNGTFSVKKNDNL 553

  Fly   283 EECGKLYTTIGALKMHIRTHTLPCKCPICGKAFSRPWLLQGHIRTHTGEKPFQCPDCPRSFADRS 347
            |:...:...        |.:.....|.:|||.|:||:.|:.|:||||.|:||.|..|.::||.:.
Yeast   554 EKLDSVTNN--------RKNPANFACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQH 610

  Fly   348 NLRAHQQTHVDVKKYAC---------QVCHKSFSRMSLLNKH----SSSNC 385
            :.:.|:..|...|:|.|         ..|.|.|:|...|.:|    |...|
Yeast   611 DRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRHFKTESGRRC 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snaNP_476732.1 SFP1 <245..303 CDD:227516 9/69 (13%)
C2H2 Zn finger 247..267 CDD:275368 3/19 (16%)
C2H2 Zn finger 282..302 CDD:275368 2/19 (11%)
zf-C2H2 306..328 CDD:395048 10/21 (48%)
C2H2 Zn finger 308..328 CDD:275368 10/19 (53%)
zf-H2C2_2 321..344 CDD:463886 11/22 (50%)
zf-C2H2 334..356 CDD:395048 6/21 (29%)
C2H2 Zn finger 336..356 CDD:275368 5/19 (26%)
zf-H2C2_2 348..373 CDD:463886 8/33 (24%)
C2H2 Zn finger 364..380 CDD:275368 6/24 (25%)
CRZ1NP_014371.1 COG5048 139..617 CDD:227381 87/460 (19%)
C2H2 Zn finger 571..591 CDD:275368 10/19 (53%)
Zn_ribbon_recom 598..656 CDD:433183 15/57 (26%)
C2H2 Zn finger 599..619 CDD:275368 5/19 (26%)
C2H2 Zn finger 627..655 CDD:275368 7/27 (26%)

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