DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sna and CRZ1

DIOPT Version :9

Sequence 1:NP_476732.1 Gene:sna / 34908 FlyBaseID:FBgn0003448 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_014371.1 Gene:CRZ1 / 855704 SGDID:S000004972 Length:678 Species:Saccharomyces cerevisiae


Alignment Length:506 Identity:99/506 - (19%)
Similarity:156/506 - (30%) Gaps:187/506 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DSQFAQDQ---------PQDL-------SLKRGRDE---------ETQDYQQPEPKRDY--VLNL 70
            ||.::..:         ||||       .|....|:         ...:|..|.....|  :.||
Yeast   190 DSNYSDTESNYHTPYLYPQDLVSSPAMSHLTANNDDFDDLLSVASMNSNYLLPVNSHGYKHISNL 254

  Fly    71 SKTPERNSSSSSNSCLLSPPVEAQDYLPTEIHMRGL--TAGTTGYTTATPTTINPFQSAFVMAAG 133
            .:..:..|.:.|::.|||    |.:.........|:  ||.|...|.|    ||..:      .|
Yeast   255 DELDDLLSLTYSDNNLLS----ASNNSDFNNSNNGIINTADTQNSTIA----INKSK------VG 305

  Fly   134 CN-------PISALWSSYQPHLAAFPSPASSMASPQSVYSYQQMTPPSSPGSDLETGS------- 184
            .|       |.|:.           |||::..|....:.|.|:......|..:.:.|:       
Yeast   306 TNQKMLLTIPTSST-----------PSPSTHAAPVTPIISIQEFNEGHFPVKNEDDGTLQLKVRD 359

  Fly   185 -------------EPEDLSVRNDIPLPALFHLFDE------AKSSSSGASVSSSSGYSYTPAMSA 230
                         .|:|....|: .|..:...|::      .|...|....|.:|..|:|...|:
Yeast   360 NESYSATNNNNLLRPDDNDYNNE-ALSDIDRSFEDIINGRKLKLKKSRRRSSQTSNNSFTSRRSS 423

  Fly   231 SS---------ASVAANHAK--------------------------------------------- 241
            .|         .|::||..|                                             
Yeast   424 RSRSISPDEKAKSISANREKLLEMADLLPSSENDNNRERYDNDSKTSYNTINSSNFNEDNNNNNL 488

  Fly   242 ------------NYRFKCDECQKMYSTSMGLSKHRQFHCPAAECNQE------------KKTHSC 282
                        |.:.:.|:..|.....:.:....||.......|.:            ||..:.
Yeast   489 LTSKPKIESGIVNIKNELDDTSKDLGILLDIDSLGQFEQKVGFKNDDNHENNDNGTFSVKKNDNL 553

  Fly   283 EECGKLYTTIGALKMHIRTHTLPCKCPICGKAFSRPWLLQGHIRTHTGEKPFQCPDCPRSFADRS 347
            |:...:...        |.:.....|.:|||.|:||:.|:.|:||||.|:||.|..|.::||.:.
Yeast   554 EKLDSVTNN--------RKNPANFACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQH 610

  Fly   348 NLRAHQQTHVDVKKYAC---------QVCHKSFSRMSLLNKH----SSSNC 385
            :.:.|:..|...|:|.|         ..|.|.|:|...|.:|    |...|
Yeast   611 DRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRHFKTESGRRC 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snaNP_476732.1 C2H2 Zn finger 308..328 CDD:275368 10/19 (53%)
zf-H2C2_2 321..344 CDD:290200 11/22 (50%)
zf-C2H2 334..356 CDD:278523 6/21 (29%)
C2H2 Zn finger 336..356 CDD:275368 5/19 (26%)
zf-H2C2_2 348..373 CDD:290200 8/33 (24%)
C2H2 Zn finger 364..380 CDD:275368 6/24 (25%)
C2H2 Zn finger 247..267 CDD:275368 3/19 (16%)
C2H2 Zn finger 282..302 CDD:275368 2/19 (11%)
zf-C2H2 306..328 CDD:278523 10/21 (48%)
COG5048 307..>356 CDD:227381 21/48 (44%)
CRZ1NP_014371.1 COG5048 139..617 CDD:227381 87/460 (19%)
C2H2 Zn finger 571..591 CDD:275368 10/19 (53%)
C2H2 Zn finger 599..619 CDD:275368 5/19 (26%)
C2H2 Zn finger 627..655 CDD:275368 7/27 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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