DRSC/TRiP Functional Genomics Resources

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Protein Alignment sna and SCRT2

DIOPT Version :10

Sequence 1:NP_476732.1 Gene:sna / 34908 FlyBaseID:FBgn0003448 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_149120.1 Gene:SCRT2 / 85508 HGNCID:15952 Length:307 Species:Homo sapiens


Alignment Length:275 Identity:100/275 - (36%)
Similarity:136/275 - (49%) Gaps:16/275 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 TINPFQSAFVMAAGCNPISALWSSYQPH------LAAFPSPASSMASPQSVY---SYQQMTPPSS 175
            |.:|.::|:|:.....|...  :.|.||      ..|...|...:|..:..|   :.::.:.|.|
Human    24 TYHPLETAYVLPGARGPPGD--NGYAPHRLPPSSYDADQKPGLELAPAEPAYPPAAPEEYSDPES 86

  Fly   176 PGSDLETGSEPEDLSVRNDIPLPALFHLFDEAKSSSSGASVSSSSGYSYTPAMSASSASVAANHA 240
            |.|.|.......:.:|.:...:.|.| :.|.......|.....:.|..........:....|...
Human    87 PQSSLSARYFRGEAAVTDSYSMDAFF-ISDGRSRRRRGGGGGDAGGSGDAGGAGGRAGRAGAQAG 150

  Fly   241 KNYRFKCDECQKMYSTSMGLSKHRQFHCPAAECNQEKKTHSCEECGKLYTTIGALKMHIRTHTLP 305
            ..:|..|.||.|.|:||..||:|:|.|    .....:....|..|||.|.::.||.||:.||.|.
Human   151 GGHRHACAECGKTYATSSNLSRHKQTH----RSLDSQLARKCPTCGKAYVSMPALAMHLLTHNLR 211

  Fly   306 CKCPICGKAFSRPWLLQGHIRTHTGEKPFQCPDCPRSFADRSNLRAHQQTHVDVKKYACQVCHKS 370
            .||.:||||||||||||||:|:|||||||.|..|.::||||||||||.|||...|.|.|:.|.||
Human   212 HKCGVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAFKHYRCRQCDKS 276

  Fly   371 FSRMSLLNKHSSSNC 385
            |:..|.|:||..:.|
Human   277 FALKSYLHKHCEAAC 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snaNP_476732.1 SFP1 <245..303 CDD:227516 22/57 (39%)
C2H2 Zn finger 247..267 CDD:275368 11/19 (58%)
C2H2 Zn finger 282..302 CDD:275368 9/19 (47%)
zf-C2H2 306..328 CDD:395048 17/21 (81%)
C2H2 Zn finger 308..328 CDD:275368 16/19 (84%)
zf-H2C2_2 321..344 CDD:463886 14/22 (64%)
zf-C2H2 334..356 CDD:395048 14/21 (67%)
C2H2 Zn finger 336..356 CDD:275368 13/19 (68%)
zf-H2C2_2 348..373 CDD:463886 15/24 (63%)
C2H2 Zn finger 364..380 CDD:275368 7/15 (47%)
SCRT2NP_149120.1 SNAG domain. /evidence=ECO:0000250 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..90 11/57 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..148 2/31 (6%)
C2H2 Zn finger 157..177 CDD:275368 11/19 (58%)
zf-C2H2 212..234 CDD:395048 17/21 (81%)
C2H2 Zn finger 214..234 CDD:275368 16/19 (84%)
zf-H2C2_2 227..250 CDD:463886 14/22 (64%)
C2H2 Zn finger 242..262 CDD:275368 13/19 (68%)
zf-C2H2 242..262 CDD:395048 13/19 (68%)
zf-H2C2_2 254..278 CDD:463886 14/23 (61%)
C2H2 Zn finger 270..286 CDD:275368 7/15 (47%)
Blue background indicates that the domain is not in the aligned region.

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