DRSC/TRiP Functional Genomics Resources

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Protein Alignment sna and ZIPIC

DIOPT Version :10

Sequence 1:NP_476732.1 Gene:sna / 34908 FlyBaseID:FBgn0003448 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_651765.1 Gene:ZIPIC / 43566 FlyBaseID:FBgn0039740 Length:457 Species:Drosophila melanogaster


Alignment Length:206 Identity:52/206 - (25%)
Similarity:83/206 - (40%) Gaps:64/206 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 SSASVAANHAKNYRFKCDECQKMYSTSMGLSKH-RQFHCPAAECNQEKKTHSCEECGKLYTTIGA 294
            ||.....|      .:|..|.:.:|:....:.| ::.|.|.         :.|::|||...:...
  Fly   249 SSGEYTVN------IQCPSCPEKFSSRRAYNVHTKREHFPG---------YVCDQCGKTLQSYSG 298

  Fly   295 LKMHIRTHTLPCK---CPICGKAFSRPWLLQGHIRTHTGEKPFQCPDCPRSFA------------ 344
            ...|::.|. |.|   ||:|.:.|||.:.|:.|:..|:||.|:||..|.:.|.            
  Fly   299 FIGHLQNHE-PVKQFACPVCPERFSRKFRLKHHMAWHSGETPYQCDVCSKRFVHKVALYKHKMIH 362

  Fly   345 -----------------DRSNLRAHQQTHVDVKKYACQVCHKSFSRM----SLLNKHSS------ 382
                             .:::|..|.::|...|.:||.||:|.||:|    :.|.:|.|      
  Fly   363 DSETKRLECQVCGFKTRTKAHLERHMRSHTGDKPFACPVCNKRFSQMYNMKAHLREHESPGTNRH 427

  Fly   383 -----SNCTIT 388
                 |.||.|
  Fly   428 RRFHCSKCTHT 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snaNP_476732.1 SFP1 <245..303 CDD:227516 11/58 (19%)
C2H2 Zn finger 247..267 CDD:275368 4/20 (20%)
C2H2 Zn finger 282..302 CDD:275368 5/19 (26%)
zf-C2H2 306..328 CDD:395048 9/24 (38%)
C2H2 Zn finger 308..328 CDD:275368 8/19 (42%)
zf-H2C2_2 321..344 CDD:463886 9/22 (41%)
zf-C2H2 334..356 CDD:395048 6/50 (12%)
C2H2 Zn finger 336..356 CDD:275368 5/48 (10%)
zf-H2C2_2 348..373 CDD:463886 10/24 (42%)
C2H2 Zn finger 364..380 CDD:275368 8/19 (42%)
ZIPICNP_651765.1 C2H2 Zn finger 286..306 CDD:275368 5/19 (26%)
C2H2 Zn finger 314..334 CDD:275368 8/19 (42%)
SFP1 <336..419 CDD:227516 20/82 (24%)
C2H2 Zn finger 342..391 CDD:275368 5/48 (10%)
zf-H2C2_2 383..408 CDD:463886 10/24 (42%)
C2H2 Zn finger 399..419 CDD:275368 8/19 (42%)
C2H2 Zn finger 432..449 CDD:275368 4/7 (57%)

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