DRSC/TRiP Functional Genomics Resources

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Protein Alignment sna and CG7691

DIOPT Version :9

Sequence 1:NP_476732.1 Gene:sna / 34908 FlyBaseID:FBgn0003448 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_650728.1 Gene:CG7691 / 42228 FlyBaseID:FBgn0038626 Length:283 Species:Drosophila melanogaster


Alignment Length:83 Identity:42/83 - (50%)
Similarity:54/83 - (65%) Gaps:5/83 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 KCPICGKAFSRPWLLQGHIRTHTGEKPFQCPD--CPRSFADRSNLRAHQQT--HVDVKKYACQVC 367
            :|..|.|.|...|:|..|.|||||||||.|||  |.::|:||||||:||:|  |.: .::.|..|
  Fly   190 ECIDCDKKFDHSWMLTAHTRTHTGEKPFVCPDGSCRKAFSDRSNLRSHQRTMGHHE-WQHQCGQC 253

  Fly   368 HKSFSRMSLLNKHSSSNC 385
            .|.||:.|.||:||...|
  Fly   254 GKYFSQFSYLNRHSLDAC 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snaNP_476732.1 C2H2 Zn finger 308..328 CDD:275368 8/19 (42%)
zf-H2C2_2 321..344 CDD:290200 15/24 (63%)
zf-C2H2 334..356 CDD:278523 15/25 (60%)
C2H2 Zn finger 336..356 CDD:275368 14/23 (61%)
zf-H2C2_2 348..373 CDD:290200 11/26 (42%)
C2H2 Zn finger 364..380 CDD:275368 8/15 (53%)
C2H2 Zn finger 247..267 CDD:275368
C2H2 Zn finger 282..302 CDD:275368
zf-C2H2 306..328 CDD:278523 8/20 (40%)
COG5048 307..>356 CDD:227381 30/52 (58%)
CG7691NP_650728.1 COG5048 188..>271 CDD:227381 41/81 (51%)
C2H2 Zn finger 191..211 CDD:275368 8/19 (42%)
zf-H2C2_2 203..229 CDD:290200 15/25 (60%)
C2H2 Zn finger 219..244 CDD:275368 14/24 (58%)
C2H2 Zn finger 250..266 CDD:275368 8/15 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2462
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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