DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment sna and odd

DIOPT Version :9

Sequence 1:	NP_476732.1	Gene:	sna / 34908	FlyBaseID:	FBgn0003448	Length:	390	Species:	Drosophila melanogaster
Sequence 2:	NP_722922.1	Gene:	odd / 33583	FlyBaseID:	FBgn0002985	Length:	392	Species:	Drosophila melanogaster

Alignment Length:	380	Identity:	88/380 - (23%)
Similarity:	136/380 - (35%)	Gaps:	108/380 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    43 DLSLKRGRDEETQDYQQPEPKRDYVLNLSKTPERNSSSSSNSCLLSP-----PVEAQDYLPTEIH 102
            :|:|.|.:|...:|:...:.:|:..|:...||....:.       .|     |..:::.:.|::|
  Fly    17 ELNLSREQDFAEEDFIVIKEERETSLSPMLTPPHTPTE-------EPLRRVHPAISEEAVATQLH 74

  Fly   103 MRGLTAGTTGYTTATPTTINPFQSAFVMAAGCNPISALW----SSYQPHLA--AFPSPASSMASP 161
            ||.:    ..|...........|            ..||    ...|.|.|  .:|...::.|.|
  Fly    75 MRHM----AHYQQQQQQQQQQQQ------------HRLWLQMQQQQQQHQAPQQYPVYPTASADP 123

  Fly   162 QSVYS------------YQQMTP-------------PSSPGSDLETGSEPEDLSVRNDIPLPALF 201
            .:|:.            |||...             |..|        .|....||   |.||..
  Fly   124 VAVHQQLMNHWIRNAAIYQQQQQQQQHPHHHHHHGHPHHP--------HPHPHHVR---PYPAGL 177

  Fly   202 HLFDEAKSSSSGASVSSSSGYSYTPAMSASSASVAANHAKNYRFKCDECQKMYSTSMGLSKHRQF 266
            |        |..|:|.... :...|.:....|..|:.              :.|.:.|.|:
  Fly   178 H--------SLHAAVMGRH-FGAMPTLKLGGAGGASG--------------VPSGATGSSR---- 215

  Fly   267 HCPAAECNQEKKTHSCEECGKLYTTIGALKMHIRTHT--LPCKCPICGKAFSRPWLLQGHIRTHT 329
                     .||...|:.|.:.:|....|.:|.||||  .|..|.||||||.|...|:.|...|:
  Fly   216 ---------PKKQFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHS 271

  Fly   330 GEKPFQCPDCPRSFADRSNLRAHQQTHVDVKKYACQVCHKSFSRMSLLNKHSSSN 384
            .:|||:|.||.:.|.....|..|:.||::...:.|.:|.:||::.:.|..|..|:
  Fly   272 KDKPFKCSDCGKGFCQSRTLAVHKVTHLEEGPHKCPICQRSFNQRANLKSHLQSH 326

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
sna	NP_476732.1	C2H2 Zn finger	308..328	CDD:275368	10/19 (53%)
		zf-H2C2_2	321..344	CDD:290200	9/22 (41%)
		zf-C2H2	334..356	CDD:278523	7/21 (33%)
		C2H2 Zn finger	336..356	CDD:275368	6/19 (32%)
		zf-H2C2_2	348..373	CDD:290200	8/24 (33%)
		C2H2 Zn finger	364..380	CDD:275368	5/15 (33%)
		C2H2 Zn finger	247..267	CDD:275368	3/19 (16%)
		C2H2 Zn finger	282..302	CDD:275368	6/19 (32%)
		zf-C2H2	306..328	CDD:278523	10/21 (48%)
		COG5048	307..>356	CDD:227381	20/48 (42%)
odd	NP_722922.1	COG5048	<203..334	CDD:227381	45/151 (30%)
		C2H2 Zn finger	222..242	CDD:275368	6/19 (32%)
		zf-H2C2_2	234..259	CDD:290200	14/24 (58%)
		C2H2 Zn finger	250..270	CDD:275368	10/19 (53%)
		zf-H2C2_2	262..285	CDD:290200	9/22 (41%)
		C2H2 Zn finger	278..298	CDD:275368	6/19 (32%)
		zf-C2H2	304..326	CDD:278523	6/21 (29%)
		C2H2 Zn finger	306..326	CDD:275368	6/19 (32%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	54	1.000	Inparanoid score	I1809
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.050