Protein Alignment sna and Snai3

DIOPT Version :10

• Sequence 1: NP_476732.1
• Gene: sna / 34908
• FlyBaseID: FBgn0003448
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: XP_006531137.1
• Gene: Snai3 / 30927
• MGIID: 1353563
• Length: 327
• Species: Mus musculus
• Alignment Length: 374
• Identity: 111/374 - (29%)
• Similarity: 144/374 - (38%)
• Gaps: 151/374 - (40%)

  Fly    41 PQDLSLKRGRDEETQDYQQPEPKRDYVLNLSKTPERNSSSSSNSCLLSPPVEAQDYLPTEIHMRG 105
            |:...:|........:|.:.|..|:               ::.||.....:....:||.|
Mouse     2 PRSFLVKTHSSHRVPNYGKLETLRE---------------ANGSCSACKELAGSRHLPDE----- 46

  Fly   106 LTAGTTGYTTATPTTINPFQSAFVMAAGCNPISAL--WSSYQPHLAAFPSPASSMASPQSVYSYQ 168
                                     .|.|||...|  |.|           .|::|.
Mouse    47 -------------------------EAPCNPSDPLQPWDS-----------TSAVAC-------- 67

  Fly   169 QMTPPSSPGSDLET----GSEPEDLS-------------VRNDIPLPALF--------------- 201
             ::.|..| :..||    |.||::.|             :::...||.|.
Mouse    68 -ISLPLLP-NHRETLGVSGPEPQETSWVGPRAAQAPSVTLKDSFTLPPLLVLPTRWPPILGPDGA 130

  Fly   202 ---HLFDEAKSSSSGASVSSSSGYSYTPAMSASSASVAANHAKNYRFKCDECQKMYSTSMGLSKH 263
               ||..|..|...|:                              |:|..|.:.|.|..||::|
Mouse   131 LNEHLRAEGTSRVPGS------------------------------FECIHCHRPYHTLAGLARH 165

  Fly   264 RQFHC--PAAECNQEKKTHSCEECGKLYTTIGALKMHIRTHTLPCKCPICGKAFSRPWLLQGHIR 326
            :|.||  |..      :..:|..|.|.|.::||||||||||||||.|.:||||||||||||||||
Mouse   166 QQLHCHLPTG------RAFTCRYCDKEYASLGALKMHIRTHTLPCICKVCGKAFSRPWLLQGHIR 224

  Fly   327 THTGEKPFQCPDCPRSFADRSNLRAHQQTHVDVKKY----------ACQ 365
            |||||||:.|..|.|:||||||||||.||||..|||          :||
Mouse   225 THTGEKPYTCSHCSRAFADRSNLRAHLQTHVGTKKYRTGPSSLLPVSCQ 273

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sna	NP_476732.1	SFP1	<245..303	CDD:227516	25/59 (42%)
		C2H2 Zn finger	247..267	CDD:275368	8/19 (42%)
		C2H2 Zn finger	282..302	CDD:275368	12/19 (63%)
		zf-C2H2	306..328	CDD:395048	18/21 (86%)
		C2H2 Zn finger	308..328	CDD:275368	17/19 (89%)
		zf-H2C2_2	321..344	CDD:463886	16/22 (73%)
		zf-C2H2	334..356	CDD:395048	14/21 (67%)
		C2H2 Zn finger	336..356	CDD:275368	14/19 (74%)
		zf-H2C2_2	348..373	CDD:463886	14/28 (50%)
		C2H2 Zn finger	364..380	CDD:275368	2/2 (100%)
Snai3	XP_006531137.1	C2H2 Zn finger	149..169	CDD:275368	8/19 (42%)
		C2H2 Zn finger	180..200	CDD:275368	12/19 (63%)
		C2H2 Zn finger	206..226	CDD:275368	17/19 (89%)
		zf-C2H2	206..226	CDD:395048	17/19 (89%)
		zf-H2C2_2	219..242	CDD:463886	16/22 (73%)
		C2H2 Zn finger	234..254	CDD:275368	14/19 (74%)