DRSC/TRiP Functional Genomics Resources

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Protein Alignment sna and Zfp747

DIOPT Version :9

Sequence 1:NP_476732.1 Gene:sna / 34908 FlyBaseID:FBgn0003448 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_780769.1 Gene:Zfp747 / 269997 MGIID:2443581 Length:422 Species:Mus musculus


Alignment Length:171 Identity:58/171 - (33%)
Similarity:77/171 - (45%) Gaps:22/171 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 SGASVSSSSGYSYTPAMSASSASVAANHAKNYRFKCDECQKMYSTSMGLSKHRQFHCPAAECNQE 276
            |.|..|:...:.||             |.....|:|.:|.|.:.....||.||..|       :.
Mouse   160 SFARRSTLEAHMYT-------------HTGEKPFQCPDCNKRFGRYSSLSTHRAIH-------RG 204

  Fly   277 KKTHSCEECGKLYTTIGALKMHIRTHT--LPCKCPICGKAFSRPWLLQGHIRTHTGEKPFQCPDC 339
            ::.|.|.:|||.:|....|..|:.:||  .|.:||.|.|.|.|...|..|...|.||:|.|||||
Mouse   205 ERPHQCPDCGKGFTQRCTLVAHMYSHTGEKPFQCPDCNKCFGRYSSLSMHRAIHRGERPHQCPDC 269

  Fly   340 PRSFADRSNLRAHQQTHVDVKKYACQVCHKSFSRMSLLNKH 380
            .:.|..|..|..|..:|...|.:.|..|.|||.|.|.|::|
Mouse   270 GKGFTQRCALVEHMYSHTGEKSFNCPDCCKSFGRPSSLSRH 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snaNP_476732.1 C2H2 Zn finger 308..328 CDD:275368 8/19 (42%)
zf-H2C2_2 321..344 CDD:290200 11/22 (50%)
zf-C2H2 334..356 CDD:278523 9/21 (43%)
C2H2 Zn finger 336..356 CDD:275368 8/19 (42%)
zf-H2C2_2 348..373 CDD:290200 9/24 (38%)
C2H2 Zn finger 364..380 CDD:275368 8/15 (53%)
C2H2 Zn finger 247..267 CDD:275368 7/19 (37%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
zf-C2H2 306..328 CDD:278523 8/21 (38%)
COG5048 307..>356 CDD:227381 21/48 (44%)
Zfp747NP_780769.1 KRAB 22..81 CDD:214630
KRAB 22..61 CDD:279668
C2H2 Zn finger 154..174 CDD:275368 5/26 (19%)
zf-H2C2_2 167..191 CDD:290200 7/36 (19%)
COG5048 <170..355 CDD:227381 55/161 (34%)
C2H2 Zn finger 182..202 CDD:275368 7/19 (37%)
zf-H2C2_2 194..219 CDD:290200 10/31 (32%)
C2H2 Zn finger 210..230 CDD:275368 7/19 (37%)
zf-H2C2_2 223..247 CDD:290200 10/23 (43%)
C2H2 Zn finger 238..258 CDD:275368 8/19 (42%)
zf-H2C2_2 250..275 CDD:290200 12/24 (50%)
C2H2 Zn finger 266..286 CDD:275368 8/19 (42%)
zf-H2C2_2 278..303 CDD:290200 9/24 (38%)
C2H2 Zn finger 294..314 CDD:275368 9/17 (53%)
zf-H2C2_2 306..331 CDD:290200 2/5 (40%)
zf-C2H2 320..342 CDD:278523
C2H2 Zn finger 322..342 CDD:275368
zf-H2C2_2 334..359 CDD:290200
C2H2 Zn finger 350..369 CDD:275368
C2H2 Zn finger 379..399 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4280
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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