Protein Alignment sna and Snai2

DIOPT Version :10

• Sequence 1: NP_476732.1
• Gene: sna / 34908
• FlyBaseID: FBgn0003448
• Length: 390
• Species: Drosophila melanogaster
• Sequence 2: NP_037167.1
• Gene: Snai2 / 25554
• RGDID: 3722
• Length: 268
• Species: Rattus norvegicus
• Alignment Length: 319
• Identity: 132/319 - (41%)
• Similarity: 161/319 - (50%)
• Gaps: 64/319 - (20%)

  Fly    69 NLSKTPERNSSSSSNSCLLSPPVEAQDYLPTEIHMRGLTAGTTGYTTATPTTINPFQSAFVMAAG 133
            |.||.|  |.|......::..|...:.|                     |..:.| :...:.:..
  Rat    12 NASKKP--NYSELDTHTVIISPYLCESY---------------------PMPVIP-KPEILTSGA 52

  Fly   134 CNPISALWSSYQPHLAAFPSPASSMASPQSVYSYQQMTPPSSPGSDLETGSEPEDLSVRNDIPLP 198
            .:||: :|:|..|    |.||..|..||.:.||.........|.||
  Rat    53 YSPIT-VWTSAVP----FHSPLPSGLSPLTGYSSSLGRVSPLPSSD------------------- 93

  Fly   199 ALFHLFDEAKSSSSGASVSSSSGYSYTPAMSASSASVAANHAKNYRFKCDECQKMYSTSMGLSKH 263
                  ..:|..|...|..|.......|.:|...|..|.      :|:|:.|.|.|||..||:||
  Rat    94 ------TSSKDHSGSESPISDEEERLQPKLSDPHAIEAE------KFQCNLCNKTYSTFSGLAKH 146

  Fly   264 RQFHCPAAECNQEKKTHSCEECGKLYTTIGALKMHIRTHTLPCKCPICGKAFSRPWLLQGHIRTH 328
            :|.||.|    |.:|:.||:.|.|.|.::||||||||||||||.|.|||||||||||||||||||
  Rat   147 KQLHCDA----QARKSFSCKYCDKEYVSLGALKMHIRTHTLPCVCKICGKAFSRPWLLQGHIRTH 207

  Fly   329 TGEKPFQCPDCPRSFADRSNLRAHQQTHVDVKKYACQVCHKSFSRMSLLNKHSSSNCTI 387
            ||||||.||.|.|:||||||||||.|||.|||||.|:.|.|:|||||||:||..|.|.:
  Rat   208 TGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHEESGCCV 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sna	NP_476732.1	SFP1	<245..303	CDD:227516	31/57 (54%)
		C2H2 Zn finger	247..267	CDD:275368	11/19 (58%)
		C2H2 Zn finger	282..302	CDD:275368	12/19 (63%)
		zf-C2H2	306..328	CDD:395048	19/21 (90%)
		C2H2 Zn finger	308..328	CDD:275368	18/19 (95%)
		zf-H2C2_2	321..344	CDD:463886	18/22 (82%)
		zf-C2H2	334..356	CDD:395048	16/21 (76%)
		C2H2 Zn finger	336..356	CDD:275368	15/19 (79%)
		zf-H2C2_2	348..373	CDD:463886	17/24 (71%)
		C2H2 Zn finger	364..380	CDD:275368	10/15 (67%)
Snai2	NP_037167.1	SNAG domain. /evidence=ECO:0000250|UniProtKB:O43623	1..20		5/9 (56%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	84..116		7/56 (13%)
		SFP1	<86..182	CDD:227516	42/130 (32%)
		C2H2 Zn finger	130..150	CDD:275370	11/19 (58%)
		C2H2 Zn finger	161..181	CDD:275368	12/19 (63%)
		C2H2 Zn finger	187..207	CDD:275368	18/19 (95%)
		zf-H2C2_2	200..223	CDD:463886	18/22 (82%)
		zf-C2H2	213..235	CDD:395048	16/21 (76%)
		C2H2 Zn finger	215..235	CDD:275368	15/19 (79%)
		zf-H2C2_2	227..252	CDD:463886	17/24 (71%)
		C2H2 Zn finger	243..259	CDD:275368	10/15 (67%)